Mercurial > repos > greg > plant_tribes_kaks_analysis
changeset 1:3aca88613abf draft
Uploaded
author | greg |
---|---|
date | Wed, 28 Jun 2017 11:17:25 -0400 (2017-06-28) |
parents | 2f0b8e19286b |
children | 2fe7044626ac |
files | kaks_analysis.xml macros.xml |
diffstat | 2 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/kaks_analysis.xml Thu Jun 08 12:53:38 2017 -0400 +++ b/kaks_analysis.xml Wed Jun 28 11:17:25 2017 -0400 @@ -1,4 +1,4 @@ -<tool id="plant_tribes_kaks_analysis" name="KaKsAnalysis" version="@WRAPPER_VERSION@.0"> +<tool id="plant_tribes_kaks_analysis" name="KaKsAnalysis" version="@WRAPPER_VERSION@.1"> <description>estimates paralogous and orthologous pairwise synonymous (Ks) and non-synonymous (Ka) substitution rates</description> <macros> <import>macros.xml</import> @@ -183,7 +183,7 @@ </data> <data name="output_rbhb" format="tabular" label="${tool.name} (paralogous pairs) on ${on_string}" /> <data name="output_kaks" format="tabular" label="${tool.name} on ${on_string}" /> - <data name="output_components" format="tabular" label="${tool.name} (significant components in the ks distribution) on ${on_string}"> + <data name="output_components" format="ptkscmp" label="${tool.name} (significant components in the ks distribution) on ${on_string}"> <filter>options_type['options_type_selector'] == 'advanced' and options_type['fit_components_cond']['fit_components'] == 'yes'</filter> </data> </outputs> @@ -191,7 +191,7 @@ <test> <param name="coding_sequences_species_1" value="species1_cds.fasta" ftype="fasta"/> <param name="proteins_species_1" value="species1_pep.fasta" ftype="fasta"/> - <param name="non_commercial_use" value="yes"/> + <param name="non_commercial_use" value="True"/> <output name="output_species1_fna" file="species1_cds.fasta" ftype="fasta" compare="contains"/> <output name="output_species1_faa" file="species1_pep.fasta" ftype="fasta" compare="contains"/> <output name="output_species1_paralog" file="output_blastn_results1.tabular" ftype="tabular" compare="contains"/>
--- a/macros.xml Thu Jun 08 12:53:38 2017 -0400 +++ b/macros.xml Wed Jun 28 11:17:25 2017 -0400 @@ -3,7 +3,7 @@ <token name="@WRAPPER_VERSION@">1.0</token> <xml name="requirements_assembly_post_processor"> <requirements> - <requirement type="package" version="1.0.0">plant_tribes_assembly_post_processor</requirement> + <requirement type="package" version="1.0.1">plant_tribes_assembly_post_processor</requirement> </requirements> </xml> <xml name="requirements_gene_family_aligner">