Mercurial > repos > greg > queue_genotype_workflow

changeset 14:f2c12986e5d4 draft

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Uploaded
author greg
date Tue, 25 Jan 2022 14:17:11 +0000
parents b5ca9d62c7bb
children c518262117f3
files queue_genotype_workflow.py
diffstat 1 files changed, 1 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/queue_genotype_workflow.py	Thu Jul 15 20:53:01 2021 +0000
+++ b/queue_genotype_workflow.py	Tue Jan 25 14:17:11 2022 +0000
@@ -427,6 +427,7 @@
             outputfh.write("\nFilterAllGenotypedSamples workflow id: %s\n" % str(fags_workflow_id))
             # Map the history datasets to the input datasets for
             # the FilterAllGenotypedSamples workflow.
+            history_datasets = get_history_datasets(gi, args.history_id)
             fags_workflow_input_datasets = get_workflow_input_datasets(gi, history_datasets, fags_workflow_name, fags_workflow_dict, outputfh)
             # Start the FilterAllGenotypedSamples workflow.
             start_workflow(gi, fags_workflow_id, fags_workflow_name, fags_workflow_input_datasets, None, args.history_id, outputfh)