Mercurial > repos > greg > vsnp_build_tables
diff vsnp_build_tables.xml @ 4:b67a6326a96b draft
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_build_tables commit 23762af1ec5da6c6f7407f6194d7a2bf9d242618"
author | greg |
---|---|
date | Wed, 16 Jun 2021 15:26:36 +0000 |
parents | abfb861df879 |
children | 8399428b1e57 |
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--- a/vsnp_build_tables.xml Sun Jan 03 16:21:29 2021 +0000 +++ b/vsnp_build_tables.xml Wed Jun 16 15:26:36 2021 +0000 @@ -69,7 +69,7 @@ </conditional> </inputs> <outputs> - <collection name="excel" type="list" label="${tool.name} on ${on_string}"> + <collection name="excel" type="list" format="xlsx" label="${tool.name} on ${on_string}"> <discover_datasets pattern="(?P<designation>.+)\.(?P<ext>xlsx)" directory="output_excel_dir"/> </collection> </outputs> @@ -90,8 +90,8 @@ <param name="input_avg_mq_json" value="Mbovis-01_avg_mq.json" ftype="json" dbkey="89"/> <param name="gbk_param" value="no"/> <output_collection name="excel" type="list" count="2"> - <element name="Mbovis-01_snps_cascade_table" file="Mbovis-01_cascade_table.xlsx" ftype="xlsx" compare="sim_size"/> - <element name="Mbovis-01_snps_sort_table" file="Mbovis-01_sort_table.xlsx" ftype="xlsx" compare="sim_size"/> + <element name="Mbovis-01_snps_newick_cascade_table" file="Mbovis-01_cascade_table.xlsx" ftype="xlsx" compare="sim_size"/> + <element name="Mbovis-01_snps_newick_sort_table" file="Mbovis-01_sort_table.xlsx" ftype="xlsx" compare="sim_size"/> </output_collection> </test> <test> @@ -100,8 +100,8 @@ <param name="input_avg_mq_json" value="Mbovis-01D_avg_mq.json" ftype="json" dbkey="89"/> <param name="gbk_param" value="no"/> <output_collection name="excel" type="list" count="2"> - <element name="Mbovis-01D_snps_cascade_table" file="Mbovis-01D_cascade_table.xlsx" ftype="xlsx" compare="sim_size"/> - <element name="Mbovis-01D_sort_table" file="Mbovis-01D_sort_table.xlsx" ftype="xlsx" compare="sim_size"/> + <element name="Mbovis-01D_snps_newick_cascade_table" file="Mbovis-01D_cascade_table.xlsx" ftype="xlsx" compare="sim_size"/> + <element name="Mbovis-01D_snps_newick_sort_table" file="Mbovis-01D_sort_table.xlsx" ftype="xlsx" compare="sim_size"/> </output_collection> </test> <test> @@ -110,8 +110,8 @@ <param name="input_avg_mq_json" value="Mbovis-01D6_avg_mq.json" ftype="json" dbkey="89"/> <param name="gbk_param" value="no"/> <output_collection name="excel" type="list" count="2"> - <element name="Mbovis-01D6_cascade_table" file="Mbovis-01D6_cascade_table.xlsx" ftype="xlsx" compare="sim_size"/> - <element name="Mbovis-01D6_sort_table" file="Mbovis-01D6_sort_table.xlsx" ftype="xlsx" compare="sim_size"/> + <element name="Mbovis-01D6_snps_newick_cascade_table" file="Mbovis-01D6_cascade_table.xlsx" ftype="xlsx" compare="sim_size"/> + <element name="Mbovis-01D6_snps_newick_sort_table" file="Mbovis-01D6_sort_table.xlsx" ftype="xlsx" compare="sim_size"/> </output_collection> </test> </tests>