Mercurial > repos > greg > vsnp_get_snps

annotate test-data/Mbovis-TB.fasta @ 8:5e4595b9f63c draft

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"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_get_snps commit 7423e5bb852a786195c095b9f663aac0ec9c8fd9"
author greg
date Thu, 29 Jul 2021 12:50:01 +0000
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8
5e4595b9f63c "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_get_snps commit 7423e5bb852a786195c095b9f663aac0ec9c8fd9"
greg
parents:
diff changeset
1 >L02-19-1908_zc_vcf
5e4595b9f63c "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_get_snps commit 7423e5bb852a786195c095b9f663aac0ec9c8fd9"
greg
parents:
diff changeset
2 GACCCCTTCGCGAGGTGAAGGCTTGAAATGCCTATAAGCCCCGTCTCTGTACCCATGACTACAGGCTGGCTGAAGCTTAGACTACACTGGCGTGCCGAGAGTTGGGCCAGTKACGCCTGTCGGGGGACGTCTCCACCGGCCCCGTCGTGASYACTGCGTCCGTACCCTCACCCCACGTAGACCAACTAGTGTGTTCGCACGTGCCGCGAGCGGTATTTACGGCGATGGTGCCTCTGGGCTGCTACTCGGCCGGGAC-GAGCGTTCGCGATAAAAGGCATCGGTGCTCGGTCCCTAGACGGACTTAAAGCACCGAGCAGCCCGTCGCCCCCAGGTGAGGAGCCACGACCAAACAGCAGGGGTG---AGTTGCCCTCCCCCGTCCCCACGCTTGACCGCGCTTGTGCCCAATCGGACCCCAGTCGCTCAAGGCCGTAGGCCGTGCGATGAGCYTGGACCGTC-----G----TCGTGCGCCCCTGCAAAGTGTCCTTCCCGTGCCTGTATCAGGTCCTACATCGGGCTTTGCAACGATAGCAGACCCGCACAGCTGGTCCGCCTTGGTATAAGGTTCTCTTCGAGGTGACACGGGGGCGCACCGCTAGTCCGTCCGAGTTGGGAGCGTGCTCCGCACGGTGGT-CTCTCGCGATGCTCAACAGCCGCGTATTCAGGGTGTGAAGGACCATTTGGCCGGCCGAAGCCACACAAGTGGTCCAAACACCCGGTGATCCTCGACCAGAACGGCAACACTATGACACCCGTTGGGATGTCCGGCGGGTAGCCTCCCGCGGTACAATCACTCCGCTCCATCCTATGTCGGCC--AGGGTTGTAGGGGCAGCATGACGATCGCCATAACGAGGATCGGCACCCGGTCCAAAGGCCTTGCGTCTACTCTCGCGGCCCCCGGGGGGAAGGTTGCGGGCGCTGACAGCGGACTCGCAACCTGGCCGTTCCCTCCCAAACGTACGTCACAACGCCCCCAAATCCGGAATAGTGCGGGGCGGCGATAAAGGCGGTTCCCGCGACCGTTCCAATTGCCGGCTGCACTGCATGTTCGCGGTTGCGGAGGTGCCTTGTACGGTTGCCAACAACGCTGGTGTGCCAACGGCCAACGCGATGATATGATTCGGGCTTCGGCCACACCTGTCTGGAGTAGCGCGCCGAATGAACCGGGAAATCCCGCCCTGTCATGAGTACACGAAGTGGCTGGAGTGCCGGCGGCGCAGGAGCCGTAGCCGCCGGCGCCAGGCGGCGGCGCTGGAGGGCTTGCGGCCTACACACCTCTGCCGGGGGCTGTTGGTTTTCCAGGCGTACGTCCGAGGTTCATACACTCATTCAGAGTCCCTTCACGCCAGCCGCATCTAACTCAGGTCATCTCGCTCTCACTTTGGCATGCATCTGTATCACCGCGGCAGCTGTGCGTTCATGTCGATCG
5e4595b9f63c "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_get_snps commit 7423e5bb852a786195c095b9f663aac0ec9c8fd9"
greg
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diff changeset
3 >L03-16-0255_zc_vcf
5e4595b9f63c "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_get_snps commit 7423e5bb852a786195c095b9f663aac0ec9c8fd9"
greg
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diff changeset
4 AGTTAGCCAGGAGAACGCCTGACCGGCGCCTTAGCAGTACTCCTCGACGAGTCCGCTCTCGAACCCAATAGAGCATCCAACACGCCTGACGCGAAGCGCCGCCGAATCGTCTGTAGTCTCATAGACGGGGACTGGTTGGCTTTCGTCCTGGTCTGACGCCTAGCTGTCTGTTGTGGTGGGGCCCGGGCACCGCCCTGTGAACGGTCGCGGAAACGCCCGCACATACCACAGCCTGCAATCTTCGGCYRKSMRSRRYTSWKYRYYYRYRRYMRRRKKSRYMRRYRSKSRRYSSYYRKRMRSRYYYRMRKYMYYSRRYRRYYSSKSRYMSSYRRRYKMRRMRMYRYRRYYRRRYRKYRRRRRYRGGCRKYYAGGGCTTTAAACGTAAGTCTCCACTTAACACCTGGTTTGGCAAAGCTAAGACGACGCAAAAGCACCCGTCAGRYSRYRRRSYYRRRSSRWYCTGCCTACCGCTAGCGATTTTGATGCCCCACTCCCCATACCTTGAGCCTCTTGCACGACCGGAATGCCATGGACCGGGTGGGTTTGTCGGAGGAGTCGATGGCAGGCCCCAACCTCTCCYRMCACTCTGTACAAATATGTCACGGTGTTCCGAAAAGTAACGGTGGAGCTTACGCGCCATTCTCTCGATACCCTCGGGCACGTAGTGGGCTGCAAGGTAGGCGGGTGCCGATTGGATGAGGAAGGGGAGGACCAGTTGCGTGTAAATCAGCTTCGAGTTGCGGTCATGGTGCCGCAGTCCGCTACAAGGAACATAATAAACCGTCCATAATAACGCCGCTGACTTCCCTTCGTGGGGACTGAATGTTAAAGCACGAGAACCCCGCACCAGTAATCTAACCGAGATCAATAATACTACTCCCGACTAACTTATTCCGTAGTGTAATCTGTGCCCCTGGGCCGGTAATTATCCGTCAGAACTGAATGGAACCTTCTCGGTTCCTTGGGCCCGTGGTACGGCCGCATACGTGTACAGGCGATGTCAAATTTTCCGGGAAAGCACCGGTAAAGTTCGATACGGCCAAAATTGGGTGACCCACCTACAAGCCCAAGCCCCAACCGCGTAGGCACACGTGGTCATCGGGGCTCGGTAACTGGTCCAGCAGGCCGGGTCGGAGCATATGTGGGGCCAAGCACTACCATAGAGGTGAGGGTATAGCGCGCTTTATCACACTGGAGACGTGGGGGTCAAGCAAGTCAGGAATAGTGGAAAGGGTTCGTCGATGACTACAGCGAGATTCTATCACGTGATCCCTATTGCCTGTGGCCACATGACCCTCCCCGTACCCCACGGTTACGTAGTTCCAACCCGCGCGTGTTCCAGAGAGAATCC--CTCTAATTTACCTGGCTCGCACCTACGCAATGTCCGTCCCAAGGTTTGCTCGCCCGAATATGCAGTGCTCCTACCACTACTAGCTA
5e4595b9f63c "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_get_snps commit 7423e5bb852a786195c095b9f663aac0ec9c8fd9"
greg
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diff changeset
5 >L03-13-2334_zc_vcf
5e4595b9f63c "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_get_snps commit 7423e5bb852a786195c095b9f663aac0ec9c8fd9"
greg
parents:
diff changeset
6 AGTTAGCTATGAGAACTCCGAACCAGCGCCTTTGCGGTATTGCGTGACAAGTTTGCTCTCGAGCCAAATAGGGCACCCGACACGTCTGACG-TAAGCGCCTCCAAATGGTCTGTGGCCTCCTAAACGCCGACTGGTTACGTTTCGCGCTGGTCTGATCTTTAGCTGCCTGCTGTACTGGCATTCGGGCACGGCCCTACGAACAGTCGCGAAAACGCCCGTACATCCCGCGGACTGCAATCTTCGGCYRKSMRSRRYTSWKYRYYYRYRRYMRRRKKSRYMRRYRSKSRRYSSYYRKRMRSRYYYRMRKYMYYSRRYRRYYSSKSRYMSSYRRRYKMRRMRMYRYRRYYRRRYRKYRRRRRYRAGCRKYYAGGGTTTTAAACGTAAGCCTCCACTCAACATTTGACTTGACAAAGACAAGACGGTGAGCGAGTACCCATGAGRYSRYRAGCTTGGACCGTC--T--T----CTGGCGATTCCGATGCCCTACTTCCTATGCGCCGAGCCTCTTGGACGACCGTAATGCCGTGGCGCGGATGAGCTTTTCGGAGGAAGTGATGGCAAGCCCCGACCTCTCCYRCCACTCCGTACAGGTACGTAATGGTTCTCCGAACGGCAACAACAGGGCCTGTGTACCATCATCTCGATGCCCTCGGAGCCGTACGGGGCCGCAGGCCAGGCAAGTGCCGGTTGAATGAAGAAGGGGAGGACCAGTCGCGTGTAAATCGGCTTCGAGTTGGGGTCGTGGCGGCGCAGTCTGTGACAACGAATACAATAGACCTCGTACAATAACGTCGCTGACTTCTCTTCGTGGGGACTAAATGTTGAAGCGCGAAAAGCGAGCACTAGAAACATACAAACAATCAATAGTAATACCTCCGACTATTGTACCCCGCAGTATAGTTTGTACCCCTGGTCCGCTAAGTATCCGCCGCAACTTAATGGAACCGTTTCGGTCCTTTGGGTCCACATTCTGGTCGGATACGTGTAGAGGCGACATCAAATTTTCCGGGCAAGCACCGGTAAGGCTCGATACGGCCACAATACCGTGAACCACCTGTAGGTGAGAGCGCCAACCACGTATGCGTCCATGGTCAGCAGATCTTGGTAATTAGCCAAGCAGGACAGGGACTAGCTTATGTGGGGTCAACCAGAACCACAGGGGTGCGAGTATACGGCGCTTTGCTACACTGGGGATGTGGAGGGCAAGCAGGTCACGAGCGATAGGAAGAGTTCGTTGATCGCTATAACCATGTTCTATCACGTCATCCCCATTGCCTGCGCTCACGTGACCCTTCCCGTACCCCAAGATTACGTAGCTCCAACCTGCGGGTTTTCCAGGAAGAATCTCATTTTNATCTACTTGGCTCGCACCTGCGCAATGCCTGTCTCAGGGGTCGCCCTCCCGCATGTTCAGTGCGCCTGCCACCATTAGCTA
5e4595b9f63c "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_get_snps commit 7423e5bb852a786195c095b9f663aac0ec9c8fd9"
greg
parents:
diff changeset
7 >root
5e4595b9f63c "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_get_snps commit 7423e5bb852a786195c095b9f663aac0ec9c8fd9"
greg
parents:
diff changeset
8 GACCACCTAGCGGGGCGCCGGACCGGCGCCTCTGTAGGCCTCGTCTACGTACCCGCTCCCGCACCCTATAGGGCGCTCAGACCACACGGGCCTGAGGGCAGTCGAGTCGTCGACGGCCTCCTGGACACGGCCCGGCCGGCCCCCGCGCGGCCACGGCGTCCAGACCCCCGCTGCACTGGGACCCGCGCGCGGCCCTGCGCACGGTCGCAGAGATGCTCACGCAGACCGTGCCCCGCGGCCTTCGGCTATGAACAGTCCTTTACCTATAGCCGGGTTGGCAAACAGGGAACGGTCGTGAACGTCCGCGTTCTTCGATGATTGCGGATAGGTGAACTCAACAATGTAGTTGGGTGTTGAAAACAGAGGTCCGCCCTCCCCAACCCACGCCTCCAACCGACACTTGGCTTAACAAGACCAAGGTGGCTCAAGGGCACCCGCCGGATCGCAGAGCCAAGGGAATTCTTTGTTTACCGTGCGCTCCGGCGCCCTACCCCCCACGCGCCGAGCCCCTGTCCCAAACGGAGCGTCGTGGCGCTGGTGGGCTCGTCGGGGTGGTCGGTCGTGGGCCCCGACCTTCTCTAAGGCTACGCGGAGGTGCGCCGCGGGTCCGCCAGAGTTGGGAGCGGGCCCCGCGCGCTATTACCTTCGTGCCCTTGGACACGCGCGGATCCGGGGGGTGGGCGAGCACTGGTCGGGCCGAGGAGGGACGAGCGGGTCGCGCGTAAGTCGGCTCCCGGTTGGGGTGGCAGCGCCATGGCCCCCGTCAGGGTGTACGGTAGACCGCCTCCAATAGCACCGCCGCCCCCCCTCAGCCGAGGCCGGATAGTGGAGCGCGGGGGCCGCGCGACGGTCACCTTAACGAGGATCGTCACCCTACCCCAGGGTCTTGCGTCCACTATCGCGGTCTGCGGGGCTGGGGCGGCAAGCGCCGGCAGCAGCCTAGTGGACCCGCCGCGGTCCCCCGGGCCCACGTTACGGCGGCACCCGTGCAGGGGTGGTGCCAGGCTGCGCGGGAGGCGGTTCGCAAGACTCTATACGGCGACAACTGCGTGACACACCTGCAGGTGCGGGCGTGCACCGCGCAGGTGCCCATGGCCATCGGGTCCCGATGGCCAGCCCAACGGTACGGGTCGGGCTTCGGGCGGGCCTGACCGGAGCCGCAGGGGTGAGGGACTAGGGCGCCCTGCCACGCTGGGGGTATGCGGAGCGGGTGGGTCGCGGGCGGCGGAGGGGCTTCGTCGGTCGGTGCCACGCGGCTGCGCCAGGTGGTCCGCGTTCCACGCGCCCCCGCCGCCCGCTCCTGGCCCTACGGTCACGTGGCCGCAGCTCGCGCGCTCTCTCGGAAGCATTTTGCTCCGACCTCCTCTACTCGCAGCTACGTCACGCCCACCTCGGCATTCGCCCGTCTCAACGCGCCGGCCGCCCGCCACTATTGGCTG