Mercurial > repos > guerler > springsuite
annotate planemo/lib/python3.7/site-packages/cwltool/tests/wf/1st-workflow.cwl @ 0:d30785e31577 draft
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
author | guerler |
---|---|
date | Fri, 31 Jul 2020 00:18:57 -0400 |
parents | |
children |
rev | line source |
---|---|
0
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
1 #!/usr/bin/env cwl-runner |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
2 |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
3 cwlVersion: v1.0 |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
4 class: Workflow |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
5 inputs: |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
6 inp: File |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
7 ex: string |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
8 |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
9 outputs: |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
10 classout: |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
11 type: File |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
12 outputSource: argument/classfile |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
13 |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
14 steps: |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
15 untar: |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
16 run: tar-param.cwl |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
17 in: |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
18 tarfile: inp |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
19 extractfile: ex |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
20 out: [example_out] |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
21 |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
22 argument: |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
23 run: arguments.cwl |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
24 in: |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
25 src: untar/example_out |
d30785e31577
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
guerler
parents:
diff
changeset
|
26 out: [classfile] |