Mercurial > repos > guerler > springsuite
comparison planemo/lib/python3.7/site-packages/cwltool/tests/seqtk_seq.cwl @ 0:d30785e31577 draft
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
author | guerler |
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date | Fri, 31 Jul 2020 00:18:57 -0400 |
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-1:000000000000 | 0:d30785e31577 |
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1 #!/usr/bin/env cwl-runner | |
2 cwlVersion: v1.0 | |
3 class: CommandLineTool | |
4 id: "seqtk_seq" | |
5 doc: "Convert to FASTA (seqtk)" | |
6 inputs: | |
7 - id: input1 | |
8 type: File | |
9 inputBinding: | |
10 position: 1 | |
11 prefix: "-a" | |
12 outputs: | |
13 - id: output1 | |
14 type: File | |
15 outputBinding: | |
16 glob: out | |
17 baseCommand: ["seqtk", "seq"] | |
18 arguments: [] | |
19 stdout: out | |
20 hints: | |
21 SoftwareRequirement: | |
22 packages: | |
23 - package: seqtk | |
24 version: | |
25 - r93 |