comparison planemo/lib/python3.7/site-packages/cwltool/tests/seqtk_seq.cwl @ 0:d30785e31577 draft

"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
author guerler
date Fri, 31 Jul 2020 00:18:57 -0400
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-1:000000000000 0:d30785e31577
1 #!/usr/bin/env cwl-runner
2 cwlVersion: v1.0
3 class: CommandLineTool
4 id: "seqtk_seq"
5 doc: "Convert to FASTA (seqtk)"
6 inputs:
7 - id: input1
8 type: File
9 inputBinding:
10 position: 1
11 prefix: "-a"
12 outputs:
13 - id: output1
14 type: File
15 outputBinding:
16 glob: out
17 baseCommand: ["seqtk", "seq"]
18 arguments: []
19 stdout: out
20 hints:
21 SoftwareRequirement:
22 packages:
23 - package: seqtk
24 version:
25 - r93