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annotate planemo/lib/python3.7/site-packages/cwltool/tests/seqtk_seq.cwl @ 0:d30785e31577 draft

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"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
author guerler
date Fri, 31 Jul 2020 00:18:57 -0400
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d30785e31577 "planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
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1 #!/usr/bin/env cwl-runner
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2 cwlVersion: v1.0
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3 class: CommandLineTool
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4 id: "seqtk_seq"
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5 doc: "Convert to FASTA (seqtk)"
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6 inputs:
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7 - id: input1
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8 type: File
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9 inputBinding:
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10 position: 1
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11 prefix: "-a"
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12 outputs:
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13 - id: output1
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14 type: File
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15 outputBinding:
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16 glob: out
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17 baseCommand: ["seqtk", "seq"]
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18 arguments: []
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19 stdout: out
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20 hints:
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21 SoftwareRequirement:
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22 packages:
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23 - package: seqtk
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24 version:
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25 - r93