changeset 1:52225f471c57 draft

planemo upload for repository https://github.com/shao-lab/MAnorm/tree/master/galaxy-tool
author haydensun
date Mon, 22 Jan 2018 04:40:43 -0500
parents 9cd4a30cb4f8
children 30cdbc4faefa
files test-data/output_dir/output_figures/sample1_vs_sample2_MA_plot_after_normalization.png test-data/output_dir/output_figures/sample1_vs_sample2_MA_plot_before_normalization.png test-data/output_dir/output_figures/sample1_vs_sample2_MA_plot_with_P-value.png test-data/output_dir/output_figures/sample1_vs_sample2_read_density_on_common_peaks.png test-data/output_dir/output_filters/sample1_M_above_1.0_biased_peaks.bed test-data/output_dir/output_filters/sample1_M_below_-1.0_biased_peaks.bed test-data/output_dir/output_filters/sample1_vs_sample2_unbiased_peaks.bed test-data/output_dir/output_tracks/sample1_vs_sample2_A_values.wig test-data/output_dir/output_tracks/sample1_vs_sample2_M_values.wig test-data/output_dir/output_tracks/sample1_vs_sample2_P_values.wig test-data/output_dir/sample1_vs_sample2_all_MAvalues.xls
diffstat 11 files changed, 0 insertions(+), 4162 deletions(-) [+]
line wrap: on
line diff
Binary file test-data/output_dir/output_figures/sample1_vs_sample2_MA_plot_after_normalization.png has changed
Binary file test-data/output_dir/output_figures/sample1_vs_sample2_MA_plot_before_normalization.png has changed
Binary file test-data/output_dir/output_figures/sample1_vs_sample2_MA_plot_with_P-value.png has changed
Binary file test-data/output_dir/output_figures/sample1_vs_sample2_read_density_on_common_peaks.png has changed
--- a/test-data/output_dir/output_filters/sample1_M_above_1.0_biased_peaks.bed	Mon Jan 22 04:03:44 2018 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,194 +0,0 @@
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--- a/test-data/output_dir/output_filters/sample1_M_below_-1.0_biased_peaks.bed	Mon Jan 22 04:03:44 2018 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,323 +0,0 @@
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--- a/test-data/output_dir/output_filters/sample1_vs_sample2_unbiased_peaks.bed	Mon Jan 22 04:03:44 2018 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,254 +0,0 @@
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--- a/test-data/output_dir/output_tracks/sample1_vs_sample2_A_values.wig	Mon Jan 22 04:03:44 2018 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,848 +0,0 @@
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--- a/test-data/output_dir/output_tracks/sample1_vs_sample2_M_values.wig	Mon Jan 22 04:03:44 2018 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
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--- a/test-data/output_dir/output_tracks/sample1_vs_sample2_P_values.wig	Mon Jan 22 04:03:44 2018 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,848 +0,0 @@
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--- a/test-data/output_dir/sample1_vs_sample2_all_MAvalues.xls	Mon Jan 22 04:03:44 2018 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,847 +0,0 @@
-chr	start	end	summit	M_value	A_value	P_value	Peak_Group	normalized_read_density_in_sample1	normalized_read_density_in_sample2
-chr22	17089331	17090971	355	-0.77275	4.22147	0.0175888164449	sample1_unique	14.2718	24.3837
-chr22	17600766	17601507	570	1.57851	3.24593	0.00485157966614	sample1_unique	16.39501	5.4895
-chr22	17601561	17603428	1126	2.94106	3.85712	1.7362239646e-08	sample1_unique	40.15896	5.2292
-chr22	17678919	17681229	1189	3.41949	4.19508	6.15682960343e-13	sample1_unique	59.91416	5.59964
-chr22	17737651	17739303	553	2.92689	2.29248	0.00091552734375	sample1_unique	13.50971	1.7765
-chr22	17741607	17742657	590	2.11613	2.58995	0.0042724609375	sample1_unique	12.53609	2.89163
-chr22	17744939	17746309	794	1.94216	2.94741	0.00369644165039	sample1_unique	15.12109	3.93491
-chr22	17746388	17748139	1072	2.60893	2.5222	0.00091552734375	sample1_unique	14.18865	2.32581
-chr22	17859935	17861030	198	2.55944	2.5	0.00091552734375	sample1_unique	13.73438	2.32992
-chr22	17861057	17861822	403	2.71216	2.19616	0.00277709960938	sample1_unique	11.73089	1.79015
-chr22	17915382	17916720	788	2.16246	2.32193	0.0047607421875	sample1_unique	10.57921	2.36313
-chr22	18404489	18405788	584	1.57145	2.78112	0.0138854980469	sample1_unique	11.85025	3.98725
-chr22	18592646	18594259	1266	2.72675	3.09984	3.42726707458e-05	sample1_unique	22.05777	3.33218
-chr22	18647168	18647907	552	1.10468	3.55817	0.0161167234182	sample1_unique	17.27376	8.03239
-chr22	18648072	18649118	393	1.02225	3.60473	0.0232797116041	sample1_unique	17.33787	8.53627
-chr22	18921129	18924431	2202	2.24131	4.50351	5.44949123197e-08	sample1_unique	49.32219	10.43136
-chr22	18957349	18959277	909	1.41867	4.59615	0.000165141518873	sample1_unique	39.54669	14.79272
-chr22	19136299	19137531	612	1.12669	2.90689	0.0333251953125	sample1_unique	11.08268	5.07548
-chr22	19273071	19274301	705	-0.23592	3.39232	0.0840940475464	sample1_unique	9.67566	11.39461
-chr22	19510337	19512720	750	3.36377	3.1496	1.04657374322e-06	sample1_unique	28.47226	2.76583
-chr22	19608751	19609615	602	-1.11373	3.54373	0.0161167234182	sample1_unique	7.92749	17.15545
-chr22	19962336	19962994	196	-1.95946	3.81741	9.78546449915e-05	sample1_unique	7.1487	27.80245
-chr22	20725303	20727187	707	0.76083	3.56593	0.0389666557312	sample1_unique	15.41588	9.09778
-chr22	20790009	20793276	2483	1.87549	4.06593	7.96589040419e-05	sample1_unique	32.08162	8.74334
-chr22	21310580	21312984	1139	2.80007	3.91724	6.65552519763e-08	sample1_unique	39.8712	5.72472
-chr22	21318520	21320010	627	-0.00564	4.22869	0.0642926603177	sample1_unique	18.71172	18.78501
-chr22	21385902	21387790	693	1.18896	3.96832	0.00381633115467	sample1_unique	23.63413	10.36638
-chr22	22279641	22280445	609	0.21568	2.97418	0.0981903076172	sample1_unique	8.46799	7.29213
-chr22	23487143	23488439	626	-1.72312	5.06464	2.2771538717e-07	sample1_unique	18.41845	60.80845
-chr22	23578975	23579942	559	-0.92436	3.78112	0.0186544004828	sample1_unique	9.97931	18.93915
-chr22	23583534	23585842	1538	-0.13827	5.38965	0.039499347846	sample1_unique	39.96084	43.98028
-chr22	23907486	23909535	730	3.12739	3.65189	2.30261321121e-08	sample1_unique	37.15759	4.25216
-chr22	24302548	24304742	1150	4.01623	2.78112	2.02562659979e-07	sample1_unique	27.65053	1.70883
-chr22	24320985	24322905	1007	2.93401	3.39232	2.38185748458e-06	sample1_unique	29.02703	3.7982
-chr22	24353252	24354002	309	0.69714	1.95345	0.109375	sample1_unique	4.93148	3.0417
-chr22	24550957	24553548	792	2.73583	3.62869	1.58578404807e-06	sample1_unique	31.92479	4.79249
-chr22	24819546	24821142	662	1.22608	3.69616	0.00578929670155	sample1_unique	19.82433	8.47445
-chr22	24889959	24891411	388	3.21148	2.79248	1.50799751282e-05	sample1_unique	21.08609	2.27638
-chr22	25392839	25393613	193	2.02837	2.26178	0.008056640625	sample1_unique	9.68643	2.37445
-chr22	25677590	25680097	1587	5.42196	3.41168	2.70627026648e-19	sample1_unique	69.67939	1.62529
-chr22	26564073	26566978	1751	4.5006	3.37073	2.83106871279e-13	sample1_unique	49.21513	2.17412
-chr22	26963929	26964790	278	0.78654	2.89068	0.0610961914062	sample1_unique	9.74019	5.64671
-chr22	27043421	27044757	611	1.51581	2.92899	0.0163421630859	sample1_unique	12.87852	4.50362
-chr22	27056480	27057659	610	0.34014	3.21523	0.0834617614746	sample1_unique	10.44905	8.25438
-chr22	27152818	27153280	224	1.1163	2.37744	0.0604248046875	sample1_unique	7.65069	3.52907
-chr22	27298786	27300640	528	2.80103	3.33267	7.32601620257e-06	sample1_unique	26.59688	3.81625
-chr22	27348487	27349644	512	3.16036	2.39721	0.00029182434082	sample1_unique	15.7512	1.76178
-chr22	27694887	27695868	660	0.46384	2.74593	0.0916442871094	sample1_unique	7.87811	5.71206
-chr22	27707183	27708641	675	1.00293	3.32732	0.0277233123779	sample1_unique	14.20951	7.09034
-chr22	28137536	28139572	336	2.16246	2.32193	0.0047607421875	sample1_unique	10.57921	2.36313
-chr22	28140002	28140699	177	2.11538	1.40368	0.02734375	sample1_unique	5.50739	1.27102
-chr22	28144620	28146590	1522	1.9905	2.76958	0.00259399414062	sample1_unique	13.59336	3.42079
-chr22	28171409	28172993	373	2.27443	2.66096	0.00259399414062	sample1_unique	13.9112	2.87536
-chr22	28186727	28187813	730	2.46426	2.08496	0.008056640625	sample1_unique	9.96652	1.80604
-chr22	28190075	28192014	1062	4.72866	1.67878	6.48498535156e-05	sample1_unique	16.48532	0.62177
-chr22	28192342	28195285	1612	3.439	2.5222	5.00679016113e-05	sample1_unique	18.91816	1.74436
-chr22	28196190	28199406	1603	4.33893	2.92587	4.58385329694e-09	sample1_unique	34.18603	1.68928
-chr22	28200145	28201329	549	1.36419	2.48864	0.02685546875	sample1_unique	9.00505	3.49804
-chr22	29313233	29314596	627	2.34471	2.40368	0.00277709960938	sample1_unique	11.92597	2.34783
-chr22	29399802	29401859	1157	3.48784	2.91645	1.30757689476e-06	sample1_unique	25.28781	2.25407
-chr22	29450885	29452035	681	2.09682	2.29248	0.008056640625	sample1_unique	10.1323	2.36866
-chr22	29710526	29712251	962	1.67411	3.0	0.00583648681641	sample1_unique	14.2912	4.47828
-chr22	29865385	29866959	639	2.08337	3.99718	2.17251556478e-05	sample1_unique	32.87377	7.75698
-chr22	30098796	30100183	1197	2.79291	2.60473	0.00029182434082	sample1_unique	16.01315	2.31061
-chr22	30115407	30115890	296	2.51952	1.58496	0.015625	sample1_unique	7.18366	1.25284
-chr22	30116748	30117753	262	2.39582	2.05426	0.008056640625	sample1_unique	9.52798	1.81045
-chr22	30641031	30643381	1151	2.59123	4.38698	6.41116615525e-09	sample1_unique	51.36077	8.52302
-chr22	30792333	30794552	1373	3.25371	3.33621	1.74157321453e-07	sample1_unique	31.19115	3.27015
-chr22	30901132	30901972	368	1.16357	3.18316	0.018482208252	sample1_unique	13.59444	6.06865
-chr22	30969515	30971406	797	3.59691	2.96537	3.78116965294e-07	sample1_unique	27.16778	2.24531
-chr22	31197777	31200064	865	2.29229	3.27729	0.000188499689102	sample1_unique	21.45787	4.38065
-chr22	31217750	31219444	958	2.55325	3.68316	2.74297781289e-06	sample1_unique	31.12032	5.30199
-chr22	31500571	31501688	369	2.91371	1.76178	0.0048828125	sample1_unique	9.30906	1.23535
-chr22	31518633	31519721	455	0.84631	2.78112	0.0610961914062	sample1_unique	9.21686	5.12647
-chr22	31534785	31536832	1159	3.68647	3.29436	1.53449946083e-08	sample1_unique	35.20223	2.73421
-chr22	31665632	31666923	552	1.59707	2.35712	0.02685546875	sample1_unique	8.91142	2.94565
-chr22	32571279	32573074	992	3.80362	2.16096	3.43322753906e-05	sample1_unique	16.71151	1.19677
-chr22	32598219	32601736	2409	3.68647	3.29436	1.53449946083e-08	sample1_unique	35.20223	2.73421
-chr22	33196709	33200016	1630	2.80525	3.65984	9.13027179195e-07	sample1_unique	33.41595	4.78068
-chr22	33446574	33448945	1129	4.76742	1.69616	3.43322753906e-05	sample1_unique	16.91076	0.62091
-chr22	33449303	33454799	4406	4.78362	4.22199	4.19040447663e-25	sample1_unique	97.93822	3.55581
-chr22	33965387	33966106	551	1.47832	1.6427	0.08203125	sample1_unique	5.21208	1.87065
-chr22	34246955	34247915	341	2.71216	2.19616	0.00277709960938	sample1_unique	11.73089	1.79015
-chr22	34292263	34294389	735	3.39372	1.9771	0.00042724609375	sample1_unique	12.76357	1.2144
-chr22	34310091	34311030	587	2.52991	2.11441	0.008056640625	sample1_unique	10.40615	1.80182
-chr22	35237348	35238515	645	3.11087	1.85022	0.00146484375	sample1_unique	10.59752	1.2267
-chr22	35419779	35420616	647	0.73	2.40368	0.08056640625	sample1_unique	6.81484	4.10869
-chr22	35776557	35778208	735	3.41403	3.17215	5.77419996262e-07	sample1_unique	29.42897	2.76089
-chr22	35798466	35799515	560	0.56235	3.22561	0.0720806121826	sample1_unique	11.36704	7.69774
-chr22	35944165	35944872	195	1.25726	2.2047	0.05859375	sample1_unique	7.12717	2.98157
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-chr22	28121764	28123876	600	-3.65374	3.28112	2.82670953311e-08	sample2_unique	2.74014	34.48722
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-chr22	29492395	29493842	602	-2.15533	2.90368	0.00231027603149	sample2_unique	3.54556	15.79444
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-chr22	29778230	29779814	469	-2.99928	2.61441	0.000163078308105	sample2_unique	2.1656	17.31619
-chr22	30303068	30304764	1048	-4.99068	2.24593	5.21540641785e-08	sample2_unique	0.84124	26.74635
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-chr22	30651550	30652638	625	-1.11065	3.22561	0.018482208252	sample2_unique	6.36555	13.74595
-chr22	30682940	30683579	290	-2.74797	2.76958	0.000317096710205	sample2_unique	2.63097	17.6741
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-chr22	37377975	37378743	280	-2.60313	2.39068	0.00160217285156	sample2_unique	2.12743	12.92637
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-chr22	37427765	37428577	260	-2.96197	2.22972	0.00160217285156	sample2_unique	1.68032	13.09283
-chr22	37521029	37521819	192	-1.35812	2.45345	0.02685546875	sample2_unique	3.42093	8.76959
-chr22	37537827	37538692	599	-3.16829	1.87744	0.00146484375	sample2_unique	1.22544	11.01643
-chr22	37637565	37640852	2526	-5.28866	3.54373	3.67268191974e-20	sample2_unique	1.86529	72.91077
-chr22	37654748	37656164	405	-1.67225	4.04041	0.000296516445815	sample2_unique	9.21692	29.37537
-chr22	37662948	37663853	428	-2.57993	2.92587	0.000183582305908	sample2_unique	3.10782	18.58201
-chr22	37669123	37669950	487	-3.23735	1.91645	0.00079345703125	sample2_unique	1.22925	11.59254
-chr22	37881936	37883129	653	-0.94738	3.13339	0.0354080200195	sample2_unique	6.31902	12.18539
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-chr22	38429666	38430886	896	-1.31501	3.45345	0.0103147029877	sample2_unique	6.94486	17.27909
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-chr22	38559186	38560342	540	-1.65174	2.98289	0.00583648681641	sample2_unique	4.45993	14.01364
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-chr22	38680877	38681671	490	-3.82033	1.58496	0.00146484375	sample2_unique	0.79818	11.27554
-chr22	38859005	38860072	369	-1.2554	3.30735	0.0129375457764	sample2_unique	6.407	15.29566
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-chr22	39361810	39362830	526	-1.72557	2.66096	0.00694274902344	sample2_unique	3.4778	11.50146
-chr22	39377564	39379373	1080	-3.09925	3.62869	4.15593603975e-08	sample2_unique	4.22533	36.20997
-chr22	39408281	39411981	3270	-3.02271	4.05426	1.27439614417e-09	sample2_unique	5.82761	47.36059
-chr22	39688296	39689489	636	-3.90318	2.29248	9.53674316406e-06	sample2_unique	1.26654	18.94927
-chr22	39695867	39697196	848	-2.51133	3.10473	0.000188499689102	sample2_unique	3.60267	20.54044
-chr22	39848350	39849523	770	-3.63797	2.1427	6.48498535156e-05	sample2_unique	1.25155	15.58067
-chr22	39860944	39861915	342	-5.13189	1.19616	0.000228881835938	sample2_unique	0.38695	13.56771
-chr22	39867379	39871193	1981	-4.31438	3.35712	2.00373051484e-12	sample2_unique	2.29729	45.70595
-chr22	39884240	39886662	1912	-2.47633	3.08496	0.000316679477692	sample2_unique	3.597	20.0166
-chr22	39924606	39926121	545	-1.82429	3.37744	0.00171534717083	sample2_unique	5.5224	19.55662
-chr22	39952902	39953738	645	0.30443	3.43518	0.0770862102509	sample2_unique	12.02025	9.73354
-chr22	40119263	40121008	987	-3.94693	3.1496	2.42289388552e-09	sample2_unique	2.25971	34.84947
-chr22	40169764	40170759	377	-2.42107	2.58496	0.00259399414062	sample2_unique	2.59265	13.88538
-chr22	40228144	40229604	962	-3.75711	2.67878	2.421438694e-06	sample2_unique	1.74137	23.54477
-chr22	40296463	40298579	638	-3.30641	3.08496	1.89058482647e-06	sample2_unique	2.69775	26.68885
-chr22	40298805	40299656	200	-4.55522	2.0	9.53674316406e-06	sample2_unique	0.82496	19.39496
-chr22	40301073	40302393	644	-3.98062	2.33621	5.00679016113e-06	sample2_unique	1.27094	20.06376
-chr22	40315979	40317435	747	-3.86263	2.26958	1.81198120117e-05	sample2_unique	1.26424	18.39058
-chr22	40342060	40347165	1878	-5.35149	4.49114	2.6891765316e-38	sample2_unique	3.51956	143.69689
-chr22	40383881	40385414	579	-4.30993	2.5222	1.00582838058e-07	sample2_unique	1.28988	25.58391
-chr22	40436718	40437856	694	-2.61796	2.69616	0.000924110412598	sample2_unique	2.61567	16.05711
-chr22	40472617	40473933	718	-1.76903	2.87744	0.00583648681641	sample2_unique	3.98043	13.5663
-chr22	40582929	40584106	632	-1.78789	2.69616	0.00694274902344	sample2_unique	3.48755	12.04285
-chr22	40585902	40587289	1201	-2.57193	3.33089	2.21198424697e-05	sample2_unique	4.12652	24.53646
-chr22	40831918	40833075	521	-2.36519	3.0222	0.000872015953064	sample2_unique	3.57912	18.44036
-chr22	40858203	40859813	1181	-3.42596	3.40368	1.53449946083e-08	sample2_unique	3.22813	34.6951
-chr22	41017040	41018298	340	-4.66968	2.06464	2.62260437012e-06	sample2_unique	0.8292	21.10452
-chr22	41047034	41049149	967	-4.20012	4.25042	1.37231525445e-20	sample2_unique	4.43939	81.59902
-chr22	41050441	41051171	570	-3.30286	1.95345	0.00079345703125	sample2_unique	1.23287	12.16682
-chr22	41361658	41362561	200	-3.53574	2.08496	0.000228881835938	sample2_unique	1.24582	14.44832
-chr22	41762792	41764301	342	-4.25052	2.48864	3.72529029846e-07	sample2_unique	1.28644	24.48625
-chr22	41799567	41800356	334	-2.36671	2.55426	0.0042724609375	sample2_unique	2.58633	13.33934
-chr22	41919275	41920354	570	-3.68618	2.16993	6.48498535156e-05	sample2_unique	1.25426	16.14505
-chr22	41935587	41937156	753	-3.94249	2.31468	5.00679016113e-06	sample2_unique	1.26877	19.50707
-chr22	41958998	41959963	643	-1.87479	2.52764	0.0111083984375	sample2_unique	3.011	11.04281
-chr22	41989968	41990868	431	-2.71427	2.45345	0.00091552734375	sample2_unique	2.13808	14.03138
-chr22	42062546	42064172	562	-1.92315	4.26569	1.8396188576e-05	sample2_unique	9.87729	37.45964
-chr22	42093074	42093915	331	-0.94481	3.01118	0.0472106933594	sample2_unique	5.81095	11.18571
-chr22	42795515	42796250	491	-1.90318	2.29248	0.02685546875	sample2_unique	2.53308	9.47463
-chr22	42808411	42809435	441	-0.8793	2.97418	0.0472106933594	sample2_unique	5.79388	10.65774
-chr22	42932950	42934154	475	-3.04119	2.93518	3.42726707458e-05	sample2_unique	2.66583	21.94431
-chr22	42934841	42935840	556	-3.53574	2.08496	0.000228881835938	sample2_unique	1.24582	14.44832
-chr22	43042123	43043402	571	-2.13648	3.08496	0.000872015953064	sample2_unique	4.04663	17.79253
-chr22	43084056	43084935	287	-0.91116	2.56464	0.0604248046875	sample2_unique	4.3141	8.11291
-chr22	43353550	43356918	2058	-6.42197	3.05426	1.29040175558e-22	sample2_unique	0.89706	76.91777
-chr22	43402941	43404589	1069	-2.54062	2.90368	0.000317096710205	sample2_unique	3.10237	18.05079
-chr22	43499641	43500697	818	-3.73263	2.19616	3.43322753906e-05	sample2_unique	1.25688	16.70809
-chr22	43659226	43660901	1034	-3.42905	2.85712	2.421438694e-06	sample2_unique	2.20778	23.77948
-chr22	43689186	43689878	479	-2.48139	2.32193	0.00277709960938	sample2_unique	2.11585	11.81563
-chr22	43716511	43717778	395	-4.08862	2.39721	1.37090682983e-06	sample2_unique	1.27713	21.72855
-chr22	43795186	43796027	316	-1.591	2.58496	0.0174560546875	sample2_unique	3.45685	10.41405
-chr22	44364609	44366494	1490	-4.24346	2.95345	4.58385329694e-09	sample2_unique	1.77981	33.71176
-chr22	44426355	44427763	500	-4.70566	2.08496	1.37090682983e-06	sample2_unique	0.83054	21.67244
-chr22	44442268	44443222	775	-3.94249	2.31468	5.00679016113e-06	sample2_unique	1.26877	19.50707
-chr22	45071889	45074793	1463	-4.3139	4.31468	1.47408946887e-22	sample2_unique	4.46212	88.74722
-chr22	45080448	45081893	1173	-2.57857	3.1427	0.000111386179924	sample2_unique	3.61355	21.58542
-chr22	45611346	45612968	630	-3.44056	2.5	5.00679016113e-05	sample2_unique	1.7168	18.63935
-chr22	45708465	45711741	1906	-5.81794	2.71313	2.22044604925e-14	sample2_unique	0.87306	49.25164
-chr22	45998587	45999600	443	-2.50007	2.88078	0.000317096710205	sample2_unique	3.09673	17.51859
-chr22	46014387	46015177	296	-1.82075	2.24593	0.02685546875	sample2_unique	2.52373	8.91543
-chr22	46034769	46035377	468	-2.12268	2.41645	0.0111083984375	sample2_unique	2.55817	11.14087
-chr22	46462688	46464235	1095	-4.63266	2.04373	2.62260437012e-06	sample2_unique	0.82783	20.53567
-chr22	46480103	46483502	2119	-6.50267	3.09984	4.29099942762e-24	sample2_unique	0.90032	81.63834
-chr22	46589567	46590561	575	-3.53574	2.08496	0.000228881835938	sample2_unique	1.24582	14.44832
-chr22	46630205	46632040	964	-4.82782	2.81468	6.91215973347e-11	sample2_unique	1.32021	37.49406
-chr22	46786198	46787218	556	-2.17318	2.69616	0.00259399414062	sample2_unique	3.05161	13.76326
-chr22	46851230	46852461	777	-3.73263	2.19616	3.43322753906e-05	sample2_unique	1.25688	16.70809
-chr22	46959098	46960261	566	-1.12879	3.45345	0.0146124958992	sample2_unique	7.40785	16.19914
-chr22	46999309	47001409	653	-3.67385	3.29248	1.53449946083e-08	sample2_unique	2.74262	35.00296
-chr22	47044982	47046222	699	-3.31482	2.42899	0.000163078308105	sample2_unique	1.70714	16.98748
-chr22	47047805	47048545	152	-2.41588	2.28493	0.0047607421875	sample2_unique	2.10963	11.25793
-chr22	47149605	47151076	715	-2.67322	3.19616	6.5378844738e-05	sample2_unique	3.62894	23.14727
-chr22	47330272	47332573	1362	-4.26457	2.96537	4.58385329694e-09	sample2_unique	1.78149	34.24105
-chr22	47732688	47733415	541	-3.82033	1.58496	0.00146484375	sample2_unique	0.79818	11.27554
-chr22	48026267	48029425	1483	-6.48735	3.75191	9.4774232035e-38	sample2_unique	1.42231	127.60889
-chr22	49447787	49448819	651	-1.59848	2.78112	0.0138854980469	sample2_unique	3.95007	11.96178
-chr22	49764635	49765621	465	-5.74732	1.54373	2.62260437012e-06	sample2_unique	0.39779	21.36815
-chr22	50048953	50052069	1968	-4.68868	4.11681	2.45337003701e-23	sample2_unique	3.41638	88.10488
-chr22	50097692	50098812	398	-3.58788	2.11441	0.0001220703125	sample2_unique	1.24874	15.01518
-chr22	50179678	50180601	294	-4.01722	1.69616	0.00042724609375	sample2_unique	0.80527	13.03908
-chr22	50200909	50202776	1122	-4.80832	2.80367	6.91215973347e-11	sample2_unique	1.31906	36.95839
-chr22	50328011	50328960	555	-1.33519	2.95943	0.0236053466797	sample2_unique	4.89679	12.35502
-chr22	50523560	50524565	327	-2.17318	2.69616	0.00259399414062	sample2_unique	3.05161	13.76326
-chr22	50543552	50544765	680	-2.99928	2.61441	0.000163078308105	sample2_unique	2.1656	17.31619
-chr22	50555334	50558338	634	-3.45685	3.16993	3.17580997944e-07	sample2_unique	2.71604	29.82303
-chr22	50606763	50608437	293	-1.16075	3.2539	0.018482208252	sample2_unique	6.37986	14.26369
-chr22	50679295	50680533	605	-3.44056	2.5	5.00679016113e-05	sample2_unique	1.7168	18.63935
-chr22	50707546	50708451	727	-1.16264	3.9915	0.00607143592788	sample2_unique	10.63081	23.79885
-chr22	50752385	50753651	824	-2.50007	2.88078	0.000317096710205	sample2_unique	3.09673	17.51859
-chr22	50756814	50758035	795	-4.29001	1.85022	6.48498535156e-05	sample2_unique	0.81519	15.94713
-chr22	50768593	50770366	746	-4.69318	3.57105	2.05022630817e-16	sample2_unique	2.33668	60.44872
-chr22	50936245	50937827	1085	-3.40584	3.39232	2.82670953311e-08	sample2_unique	3.22523	34.18378
-chr22	50977507	50978750	386	-3.86263	2.26958	1.81198120117e-05	sample2_unique	1.26424	18.39058
-chr22	51051823	51052907	310	-2.57151	2.66993	0.000924110412598	sample2_unique	2.61023	15.516
-chr22	51059873	51061094	486	-1.86169	3.529	0.000701732933521	sample2_unique	6.05512	22.0063
-chr22	51180653	51181336	514	-3.09528	1.83621	0.002685546875	sample2_unique	1.22143	10.43855