comparison mutspecFilter.xml @ 1:748b7a8b634c draft

Uploaded

0:8c682b3a7c5b

        mutspecFilter.pl 
        --dir \$SCRIPT_PATH 
        $segDup
        $esp
        $thG
	#if $FilterdbSNP.dbSNP == "true":
           --dbSNP ${FilterdbSNP.column}
        #else
           --dbSNP 0
        #end if
	--refGenome ${refGenome}

</help>

</tool>

1:748b7a8b634c

        mutspecFilter.pl 
        --dir \$SCRIPT_PATH 
        $segDup
        $esp
        $thG
	    #if $FilterdbSNP.dbSNP == True:
           --dbSNP ${FilterdbSNP.column}
        #else
           --dbSNP 0
        #end if
	--refGenome ${refGenome}

</help>

<citations>
    <citation type="bibtex">
        @ARTICLE{ardin_mutspec:_2016,
            author = {Ardin et al},
            keywords = {Galaxy, Mutation signatures, Mutation spectra, Single base substitutions},
            title = {{MutSpec}: a Galaxy toolbox for streamlined analyses of somatic mutation spectra in human and mouse cancer genomes},
            url = {http://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1011-z}
        }
    </citation>
</citations>

</tool>