Mercurial > repos > idot > prop_venn
comparison README.md @ 0:8ea9b4e5a389
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| author | g2cmnty@test-web1.g2.bx.psu.edu |
|---|---|
| date | Wed, 22 Jun 2011 03:28:25 -0400 |
| parents | |
| children | cc6707a1e044 |
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| 1 prop_venn | |
| 2 --------- | |
| 3 | |
| 4 crates proportional venn diagrams from 2 or 3 files using google charts. | |
| 5 pure python implementation | |
| 6 | |
| 7 contains galaxy tool xml (prop_venn.xml) | |
| 8 | |
| 9 cli interface expects all arguments for the inputs concatenated | |
| 10 with , i.e. file1,file2,file3 ... | |
| 11 | |
| 12 contains an integration test for the cli interface (vennerTest.py), no galaxy unit tests. | |
| 13 | |
| 14 | |
| 15 | |
| 16 Proportional Venn Diagram: | |
| 17 -------------------------- | |
| 18 Creates a proportional Venn diagram from 2 or 3 tab delimited input files. | |
| 19 The 0 based column index decides which column is used for extracting the sets to compare between the files. | |
| 20 Multiple items with the same value per column are counted as one. | |
| 21 | |
| 22 Requirements: | |
| 23 ------------- | |
| 24 - 2-3 tab delimited input files. | |
| 25 - 0 based index of the columns to extract for each file | |
| 26 | |
| 27 Outputs: | |
| 28 -------- | |
| 29 - Html page with the proportional Venn diagram and a table for the counts in each section. | |
| 30 | |
| 31 |