Mercurial > repos > ieguinoa > tximport
comparison test-data/Araport11_subset.gff3 @ 0:2f5e9c0fe367 draft default tip
"planemo upload for repository https://github.com/ieguinoa/tximport-galaxy-wrapper commit 2bb25471c1320fb1206afa2c4daf536b6d6e275f-dirty"
| author | ieguinoa |
|---|---|
| date | Wed, 09 Oct 2019 15:38:21 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:2f5e9c0fe367 |
|---|---|
| 1 Chr1 Araport11 gene 3631 5899 . + . ID=AT1G01010;Alias=ANAC001,NAC domain containing protein 1;symbol=NAC001;tid=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 2 Chr1 Araport11 mRNA 3631 5899 . + . ID=AT1G01010.1;Parent=AT1G01010;Name=AT1G01010.1;gene_id=AT1G01010 | |
| 3 Chr1 Araport11 exon 3631 3913 . + . ID=AT1G01010.1:exon:1;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 4 Chr1 Araport11 five_prime_UTR 3631 3759 . + . ID=AT1G01010.1:five_prime_UTR;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 5 Chr1 Araport11 exon 3996 4276 . + . ID=AT1G01010.1:exon:2;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 6 Chr1 Araport11 exon 4486 4605 . + . ID=AT1G01010.1:exon:3;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 7 Chr1 Araport11 exon 4706 5095 . + . ID=AT1G01010.1:exon:4;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 8 Chr1 Araport11 exon 5174 5326 . + . ID=AT1G01010.1:exon:5;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 9 Chr1 Araport11 exon 5439 5899 . + . ID=AT1G01010.1:exon:6;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 10 Chr1 Araport11 five_prime_UTR 3759 5439 . + . ID=AT1G01010.1:five_prime_UTR;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 11 Chr1 Araport11 three_prime_UTR 5631 5899 . + . ID=AT1G01010.1:three_prime_UTR;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 | |
| 12 Chr1 Araport11 gene 6788 9130 . - . ID=AT1G01020;symbol=ARV1;tid=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 13 Chr1 Araport11 mRNA 6788 9130 . - . ID=AT1G01020.5;Parent=AT1G01020;Name=AT1G01020.5;gene_id=AT1G01020 | |
| 14 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.5:exon:1;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 15 Chr1 Araport11 five_prime_UTR 6788 6914 . - . ID=AT1G01020.5:five_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 16 Chr1 Araport11 exon 7157 7232 . - . ID=AT1G01020.5:exon:2;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 17 Chr1 Araport11 exon 7384 7450 . - . ID=AT1G01020.5:exon:3;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 18 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.5:exon:4;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 19 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.5:exon:5;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 20 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.5:exon:6;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 21 Chr1 Araport11 exon 8236 8325 . - . ID=AT1G01020.5:exon:7;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 22 Chr1 Araport11 exon 8417 8464 . - . ID=AT1G01020.5:exon:8;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 23 Chr1 Araport11 five_prime_UTR 6914 8417 . - . ID=AT1G01020.5:five_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 24 Chr1 Araport11 three_prime_UTR 8420 8464 . - . ID=AT1G01020.5:three_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 25 Chr1 Araport11 exon 8594 9130 . - . ID=AT1G01020.5:exon:9;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 26 Chr1 Araport11 three_prime_UTR 8594 9130 . - . ID=AT1G01020.5:three_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 | |
| 27 Chr1 Araport11 mRNA 6788 9130 . - . ID=AT1G01020.4;Parent=AT1G01020;Name=AT1G01020.4;gene_id=AT1G01020 | |
| 28 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.4:exon:1;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 29 Chr1 Araport11 five_prime_UTR 6788 6914 . - . ID=AT1G01020.4:five_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 30 Chr1 Araport11 exon 7157 7232 . - . ID=AT1G01020.4:exon:2;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 31 Chr1 Araport11 exon 7384 7450 . - . ID=AT1G01020.4:exon:3;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 32 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.4:exon:4;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 33 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.4:exon:5;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 34 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.4:exon:6;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 35 Chr1 Araport11 exon 8236 8464 . - . ID=AT1G01020.4:exon:7;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 36 Chr1 Araport11 five_prime_UTR 6914 8236 . - . ID=AT1G01020.4:five_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 37 Chr1 Araport11 three_prime_UTR 8443 8464 . - . ID=AT1G01020.4:three_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 38 Chr1 Araport11 exon 8594 9130 . - . ID=AT1G01020.4:exon:8;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 39 Chr1 Araport11 three_prime_UTR 8594 9130 . - . ID=AT1G01020.4:three_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 | |
| 40 Chr1 Araport11 mRNA 6788 9130 . - . ID=AT1G01020.3;Parent=AT1G01020;Name=AT1G01020.3;gene_id=AT1G01020 | |
| 41 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.3:exon:1;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 42 Chr1 Araport11 five_prime_UTR 6788 6914 . - . ID=AT1G01020.3:five_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 43 Chr1 Araport11 exon 7157 7232 . - . ID=AT1G01020.3:exon:2;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 44 Chr1 Araport11 exon 7384 7450 . - . ID=AT1G01020.3:exon:3;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 45 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.3:exon:4;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 46 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.3:exon:5;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 47 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.3:exon:6;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 48 Chr1 Araport11 exon 8236 8464 . - . ID=AT1G01020.3:exon:7;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 49 Chr1 Araport11 five_prime_UTR 6914 8236 . - . ID=AT1G01020.3:five_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 50 Chr1 Araport11 three_prime_UTR 8443 8464 . - . ID=AT1G01020.3:three_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 51 Chr1 Araport11 exon 8571 9130 . - . ID=AT1G01020.3:exon:8;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 52 Chr1 Araport11 three_prime_UTR 8571 9130 . - . ID=AT1G01020.3:three_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 | |
| 53 Chr1 Araport11 mRNA 6788 9130 . - . ID=AT1G01020.1;Parent=AT1G01020;Name=AT1G01020.1;gene_id=AT1G01020 | |
| 54 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.1:exon:1;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 55 Chr1 Araport11 five_prime_UTR 6788 6914 . - . ID=AT1G01020.1:five_prime_UTR;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 56 Chr1 Araport11 exon 7157 7232 . - . ID=AT1G01020.1:exon:2;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 57 Chr1 Araport11 exon 7384 7450 . - . ID=AT1G01020.1:exon:3;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 58 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.1:exon:4;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 59 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.1:exon:5;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 60 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.1:exon:6;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 61 Chr1 Araport11 exon 8236 8325 . - . ID=AT1G01020.1:exon:7;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 62 Chr1 Araport11 exon 8417 8464 . - . ID=AT1G01020.1:exon:8;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 63 Chr1 Araport11 exon 8571 9130 . - . ID=AT1G01020.1:exon:9;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 64 Chr1 Araport11 five_prime_UTR 6914 8571 . - . ID=AT1G01020.1:five_prime_UTR;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 65 Chr1 Araport11 three_prime_UTR 8667 9130 . - . ID=AT1G01020.1:three_prime_UTR;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 | |
| 66 Chr1 Araport11 mRNA 6788 8737 . - . ID=AT1G01020.2;Parent=AT1G01020;Name=AT1G01020.2;gene_id=AT1G01020 | |
| 67 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.2:exon:1;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 68 Chr1 Araport11 five_prime_UTR 6788 7069 . - . ID=AT1G01020.2:five_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 69 Chr1 Araport11 exon 7157 7450 . - . ID=AT1G01020.2:exon:2;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 70 Chr1 Araport11 five_prime_UTR 7157 7314 . - . ID=AT1G01020.2:five_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 71 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.2:exon:3;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 72 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.2:exon:4;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 73 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.2:exon:5;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 74 Chr1 Araport11 exon 8236 8325 . - . ID=AT1G01020.2:exon:6;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 75 Chr1 Araport11 exon 8417 8464 . - . ID=AT1G01020.2:exon:7;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 76 Chr1 Araport11 exon 8571 8737 . - . ID=AT1G01020.2:exon:8;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 77 Chr1 Araport11 five_prime_UTR 7314 8571 . - . ID=AT1G01020.2:five_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 78 Chr1 Araport11 three_prime_UTR 8667 8737 . - . ID=AT1G01020.2:three_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 | |
| 79 Chr1 Araport11 mRNA 6788 8737 . - . ID=AT1G01020.6;Parent=AT1G01020;Name=AT1G01020.6;gene_id=AT1G01020 | |
| 80 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.6:exon:1;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 81 Chr1 Araport11 five_prime_UTR 6788 7069 . - . ID=AT1G01020.6:five_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 82 Chr1 Araport11 exon 7157 7450 . - . ID=AT1G01020.6:exon:2;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 83 Chr1 Araport11 five_prime_UTR 7157 7314 . - . ID=AT1G01020.6:five_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 84 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.6:exon:3;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 85 Chr1 Araport11 exon 8236 8325 . - . ID=AT1G01020.6:exon:4;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 86 Chr1 Araport11 exon 8417 8464 . - . ID=AT1G01020.6:exon:5;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 87 Chr1 Araport11 five_prime_UTR 7314 8417 . - . ID=AT1G01020.6:five_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 88 Chr1 Araport11 three_prime_UTR 8420 8464 . - . ID=AT1G01020.6:three_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 89 Chr1 Araport11 exon 8594 8737 . - . ID=AT1G01020.6:exon:6;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 90 Chr1 Araport11 three_prime_UTR 8594 8737 . - . ID=AT1G01020.6:three_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 | |
| 91 Chr1 Araport11 gene 11649 13714 . - . ID=AT1G01030;symbol=NGA3;full_name=NGATHA3;tid=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 | |
| 92 Chr1 Araport11 mRNA 11649 13714 . - . ID=AT1G01030.1;Parent=AT1G01030;Name=AT1G01030.1;gene_id=AT1G01030 | |
| 93 Chr1 Araport11 exon 11649 13173 . - . ID=AT1G01030.1:exon:1;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 | |
| 94 Chr1 Araport11 five_prime_UTR 11649 11863 . - . ID=AT1G01030.1:five_prime_UTR;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 | |
| 95 Chr1 Araport11 three_prime_UTR 12941 13173 . - . ID=AT1G01030.1:three_prime_UTR;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 | |
| 96 Chr1 Araport11 exon 13335 13714 . - . ID=AT1G01030.1:exon:2;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 | |
| 97 Chr1 Araport11 three_prime_UTR 13335 13714 . - . ID=AT1G01030.1:three_prime_UTR;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 | |
| 98 Chr1 Araport11 mRNA 11649 13714 . - . ID=AT1G01030.2;Parent=AT1G01030;Name=AT1G01030.2;gene_id=AT1G01030 | |
| 99 Chr1 Araport11 exon 11649 12354 . - . ID=AT1G01030.2:exon:1;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 | |
| 100 Chr1 Araport11 five_prime_UTR 11649 11863 . - . ID=AT1G01030.2:five_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 | |
| 101 Chr1 Araport11 exon 12424 13173 . - . ID=AT1G01030.2:exon:2;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 | |
| 102 Chr1 Araport11 five_prime_UTR 11863 12424 . - . ID=AT1G01030.2:five_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 | |
| 103 Chr1 Araport11 three_prime_UTR 12941 13173 . - . ID=AT1G01030.2:three_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 | |
| 104 Chr1 Araport11 exon 13335 13714 . - . ID=AT1G01030.2:exon:3;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 | |
| 105 Chr1 Araport11 three_prime_UTR 13335 13714 . - . ID=AT1G01030.2:three_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 | |
| 106 |