Mercurial > repos > ifb-elixirfr > abromics_extractor_summarize

annotate test-data/integronfinder2/results.integrons @ 1:39137acb0806 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://gitlab.com/ifb-elixirfr/abromics/galaxy-tools/-/tree/galaxy_dev/abromics_galaxy_json_extractor?ref_type=heads commit 8db8564ece9607d015d3730e06854416011ec05c
author ifb-elixirfr
date Mon, 28 Aug 2023 15:05:54 +0000
parents eb95c9ca5c60
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
1 # cmd: integron_finder --cpu 4 --local-max --eagle-eyes --promoter-attI --pdf --gbk --keep-tmp --outdir /storage/scratch/piemari/60579123/integronfinder/integronfinder_10_Enterococcus_faecalis_S17_L001 /storage/scratch/piemari/60579123/integronfinder/10_Enterococcus_faecalis_S17_L001.fasta
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
2 ID_integron ID_replicon element pos_beg pos_end strand evalue type_elt annotation model type default distance_2attC considered_topology
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
3 integron_01 contig00017 contig00017_42 41235 41546 -1 NA protein protein NA CALIN No NA lin
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
4 integron_01 contig00017 contig00017_43 41543 42391 -1 NA protein protein NA CALIN No NA lin
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
5 integron_01 contig00017 attc_001 41600 41701 -1 0.15 attC attC attc_4 CALIN No NA lin
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
6 integron_01 contig00017 contig00017_44 42419 43705 -1 NA protein protein NA CALIN No NA lin
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
7 integron_01 contig00017 contig00017_45 43702 45213 -1 NA protein protein NA CALIN No NA lin
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
8 integron_01 contig00017 attc_002 44054 44100 -1 0.095 attC attC attc_4 CALIN No 2353.0 lin