Mercurial > repos > ifb-elixirfr > abromics_extractor_summarize

diff test-data/bandage/bandage_info.txt @ 0:eb95c9ca5c60 draft

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planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
author ifb-elixirfr
date Mon, 24 Jul 2023 14:57:00 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bandage/bandage_info.txt	Mon Jul 24 14:57:00 2023 +0000
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+Node count:                       222
+Edge count:                       299
+Smallest edge overlap (bp):       127
+Largest edge overlap (bp):        127
+Total length (bp):                3042326
+Total length no overlaps (bp):    3014132
+Dead ends:                        0
+Percentage dead ends:             0%
+Connected components:             2
+Largest component (bp):           3042198
+Total length orphaned nodes (bp): 3042198
+N50 (bp):                         79920
+Shortest node (bp):               128
+Lower quartile node (bp):         151
+Median node (bp):                 256
+Upper quartile node (bp):         7566
+Longest node (bp):                239204
+Median depth:                     22.997
+Estimated sequence length (bp):   3234717