Mercurial > repos > ifb-elixirfr > abromics_extractor_summarize

view test-data/bandage/bandage_info.txt @ 0:eb95c9ca5c60 draft

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planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
author ifb-elixirfr
date Mon, 24 Jul 2023 14:57:00 +0000
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Node count:                       222
Edge count:                       299
Smallest edge overlap (bp):       127
Largest edge overlap (bp):        127
Total length (bp):                3042326
Total length no overlaps (bp):    3014132
Dead ends:                        0
Percentage dead ends:             0%
Connected components:             2
Largest component (bp):           3042198
Total length orphaned nodes (bp): 3042198
N50 (bp):                         79920
Shortest node (bp):               128
Lower quartile node (bp):         151
Median node (bp):                 256
Upper quartile node (bp):         7566
Longest node (bp):                239204
Median depth:                     22.997
Estimated sequence length (bp):   3234717