Mercurial > repos > ifb-elixirfr > abromics_galaxy_json_extractor

diff abromics_galaxy_json_extractor.xml @ 3:1861b7f49aed draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://gitlab.com/ifb-elixirfr/abromics/galaxy-tools commit 12dee18b8a3e5f84bb774bc170895cd3245c57d0
author ifb-elixirfr
date Wed, 13 Sep 2023 12:58:42 +0000
parents 857426567aca
children e58c2cd8e624
line wrap: on
line diff
--- a/abromics_galaxy_json_extractor.xml	Wed Aug 30 12:53:46 2023 +0000
+++ b/abromics_galaxy_json_extractor.xml	Wed Sep 13 12:58:42 2023 +0000
@@ -186,7 +186,6 @@
             &&
         #end if
     #end for
-        && ls abromics_extracted_folder
         ]]>
     </command>
     <inputs>
@@ -609,7 +608,7 @@
         | Refseqmasher   | 0.1.2          |  output.tsv       |                                                            |
         | Shovill        | 1.1.0          |  contigs.fasta    | alignment.bam, contigs.gfa                                 |
         | Staramr        | 0.9.1          |  resfinder.tsv    | mlst.tsv, pointfinder.tsv, plasmidfinder.tsv, settings.tsv |
-        | tabular_file   |  0             |    output.tsv     | no optional files                                          |
+        | tabular_file   |  0             |  output.tsv       | no optional files                                          |
 
         ** Options **
         You can add a tool version and a database version for related tools.