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view test-data/summarize/tabular_file_output.json @ 3:1861b7f49aed draft

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planemo upload for repository https://gitlab.com/ifb-elixirfr/abromics/galaxy-tools commit 12dee18b8a3e5f84bb774bc170895cd3245c57d0
author ifb-elixirfr
date Wed, 13 Sep 2023 12:58:42 +0000
parents b77b0b1e6c74
children
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[{"analysis_software_name": "tabular_file", "reference_database_version": "", "analysis_software_version": "", "results": [{"name": "tabular_file_report", "file_path": "tests/data/dummy/tabular_file/report.tsv", "hid": "12345", "galaxy_hid": "", "content": [{"#FILE": "/storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta", "SEQUENCE": "contig00002", "START": 142975, "END": 143985, "STRAND": "+", "GENE": "bopD", "COVERAGE": "1-1011/1011", "COVERAGE_MAP": "===============", "GAPS": "0/0", "%COVERAGE": 100.0, "%IDENTITY": 98.91, "DATABASE": "vfdb", "ACCESSION": "NP_814691", "PRODUCT": "(bopD)sugar-bindingtranscriptionalregulatorLacIfamily[BopD(VF0362)][EnterococcusfaecalisV583]", "RESISTANCE": null}, {"#FILE": "/storage/scratch/piemari/60579281/abricate/10_Enterococcus_faecalis_S17_L001.fasta", "SEQUENCE": "contig00003", "START": 7884, "END": 11111, "STRAND": "-", "GENE": "fss3", "COVERAGE": "1-3228/3228", "COVERAGE_MAP": "===============", "GAPS": "0/0", "%COVERAGE": 100.0, "%IDENTITY": 99.38, "DATABASE": "vfdb", "ACCESSION": "NP_815578", "PRODUCT": "(fss3)EnterococcusfaecalissurfaceproteinFss3fibrinogenbindingprotein[Fibrinogenbindingprotein(AI273)][EnterococcusfaecalisV583]", "RESISTANCE": null}]}], "tool_has_database": false}]