Mercurial > repos > imgteam > labelimage2points

changeset 1:07525a7d9ea0 draft

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/labelimage2points/ commit b2acc1845a25828181597fe5b6982fe116a7796d
author imgteam
date Mon, 22 Jul 2019 05:03:12 -0400
parents 39e6d6a84257
children 3b7460735223
files labelimage2points.py labelimage2points.xml
diffstat 2 files changed, 5 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/labelimage2points.py	Sat Feb 09 14:36:17 2019 -0500
+++ b/labelimage2points.py	Mon Jul 22 05:03:12 2019 -0400
@@ -6,7 +6,7 @@
 from skimage.data import checkerboard
 import numpy as np
 
-
+ 
 
 def labelimage2points(input_file):
     img_in = skimage.io.imread(input_file) 
--- a/labelimage2points.xml	Sat Feb 09 14:36:17 2019 -0500
+++ b/labelimage2points.xml	Mon Jul 22 05:03:12 2019 -0400
@@ -1,13 +1,14 @@
-<tool id="ip_labelimage_to_points" name="Label to Points" version="0.1">
+<tool id="ip_labelimage_to_points" name="Label to Points" version="0.2"> 
     <description>Converts label image to points</description>
     <requirements>
         <requirement type="package" version="0.14.2">scikit-image</requirement>
         <requirement type="package" version="0.21.0">pandas</requirement>
+        <requirement type="package" version="0.15.1">tifffile</requirement>
     </requirements>
-    <command>
+    <command detect_errors="aggressive">
         <![CDATA[
         python '$__tool_directory__/labelimage2points.py' '$input' '$output'
-        ]]>
+        ]]> 
     </command>
     <inputs>
         <param name="input" type="data" format="tiff,png,jpg,bmp" label="Label image file"/>