Mercurial > repos > imgteam > projective_transformation
view projective_transformation.xml @ 1:974cf4357707 draft
"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/projective_transformation/ commit 3d389fdec0db29cf6fbd783c0501455bf624fa90"
author | imgteam |
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date | Wed, 18 Dec 2019 05:03:09 -0500 |
parents | 17f5d0c3f8a3 |
children | 1ffdb07020ee |
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<tool id="ip_projective_transformation" name="Projective Transformation" version="0.0.4"> <description>Projective Transformation</description> <requirements> <requirement type="package" version="0.14.2">scikit-image</requirement> <requirement type="package" version="0.23.4">pandas</requirement> <requirement type="package" version="1.15.4">numpy</requirement> <requirement type="package" version="1.1.0">scipy</requirement> <requirement type="package" version="0.15.1">tifffile</requirement> </requirements> <command detect_errors="aggressive"> <![CDATA[ python '$__tool_directory__/projective_transformation.py' '$fixed_image' '$moving_image' '$warp_matrix' ./out.png ]]> </command> <inputs> <param name="moving_image" type="data" format="png" label="Moving Image" /> <param name="fixed_image" type="data" format="png" label="Fixed Image" /> <param name="warp_matrix" type= "data" format="tabular" label="Warp Matrix" /> </inputs> <outputs> <data format="png" name="out" from_work_dir="out.png" /> </outputs> <tests> <test> <param name="fixed_image" value="sample1.png"/> <param name="moving_image" value="sample2.png"/> <param name="warp_matrix" value="warp_matrix.tsv"/> <output name="out" value="yam.png" ftype="png" compare="sim_size"/> </test> </tests> <help> **What it does** This tool performs a projective transformation of the input (moving) image so that it fits the fixed image. </help> <citations> <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation> </citations> </tool>