annotate collapse_pops.xml @ 1:a3ae90eb1232 draft default tip

"planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
author azomics
date Mon, 22 Jun 2020 16:34:35 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
1 <tool id="collapse_populations" name="Collapse populations" version="1.0+galaxy1">
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
2 <description>from FLOCK or Cross Sample analysis</description>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
3 <requirements>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
4 <requirement type="package" version="0.17.1">pandas</requirement>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
5 </requirements>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
6 <stdio>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
7 <exit_code range="2" level="warning" description="The color code only allows populations between 1 and 40." />
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
8 <exit_code range="3" level="warning" description="The same population to collapse into is being used several times." />
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
9 <exit_code range="4" level="fatal" description="Please provide a comma separated list of populations to collapse." />
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
10 <exit_code range="5" level="warning" description="The color code only allows populations between 1 and 40, and the same population to collapse into is being used several times." />
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
11 <exit_code range="6" level="fatal" description="The populations must be integers (i.e,: 1,2,4.)" />
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
12 <exit_code range="7" level="fatal" description="The same population is being collapsed into 2 different populations." />
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
13 </stdio>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
14 <command><![CDATA[
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
15 python '$__tool_directory__/collapse_pops.py' -o '${output}' -i '${input}' -p '${population}' -c '${collapse}'
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
16 #for $repeats in $repeat_option
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
17 -p '${repeats.population}'
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
18 -c '${repeats.collapse}'
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
19 #end for
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
20 ]]>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
21 </command>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
22 <inputs>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
23 <param format="flowclr" name="input" type="data" label="Source file"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
24 <param name="population" type="text" label="Collapse the following populations:" value="i.e.:2,3,11,25"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
25 <param name="collapse" type="text" label="Into population:" value="i.e.:4"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
26 <repeat name="repeat_option" title="more populations to manipulate:">
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
27 <param name="population" type="text" label="Collapse the following populations:" value="i.e.:2,3,11,25"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
28 <param name="collapse" type="text" label="Into population:" value="i.e.:4"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
29 </repeat>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
30 </inputs>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
31 <outputs>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
32 <data format="flowclr" name="output" label="${input.name} with renamed populations"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
33 </outputs>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
34 <tests>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
35 <test>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
36 <param name="input" value="input.flowclr"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
37 <param name="population" value="2,3,4"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
38 <param name="collapse" value="1"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
39 <output name="output" file="output.flowclr"/>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
40 </test>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
41 </tests>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
42 <help><![CDATA[
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
43 This tool collapses several populations into one.
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
44
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
45 -----
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
46
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
47 .. class:: warningmark
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
48
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
49 Tip: You can use this tool to assign specific colors to your populations in the FLOCK and Cross Sample overview tools. The color scheme we use is the following:
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
50
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
51 .. image:: ./static/images/flowtools/liz_colorcode.png
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
52
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
53 -----
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
54
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
55 **Input**
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
56
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
57 FLOCK or Cross Sample output - a table of the fluorescence intensities for each event and the population associated with each.
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
58
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
59 **Output**
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
60
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
61 The input file with selected populations replaced by the indicated population.
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
62
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
63 -----
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
64
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
65 **Example**
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
66
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
67 *Input* - fluorescence intensities per marker and population ID per event::
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
68
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
69 Marker1 Marker2 Marker3 ... Population
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
70 34 45 12 ... 1
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
71 33 65 10 ... 5
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
72 19 62 98 ... 2
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
73 12 36 58 ... 1
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
74 ... ... ... ... ...
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
75
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
76 *Populations selected:* 2, 5
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
77
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
78 *Collapse into population:* 3
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
79
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
80 *Output* - fluorescence intensities per marker and population ID per event::
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
81
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
82 Marker1 Marker2 Marker3 ... Population
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
83 34 45 12 ... 1
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
84 33 65 10 ... 3
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
85 19 62 98 ... 3
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
86 12 36 58 ... 1
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
87 ... ... ... ... ...
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
88
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
89 ]]>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
90 </help>
a3ae90eb1232 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/collapse_pop commit 1e75b0df5680c0cdd8b2b3e5d4c1f8077b430944"
azomics
parents:
diff changeset
91 </tool>