Mercurial > repos > insilico-bob > ngchm_dependencies
diff tool_dependencies.xml @ 6:87bb8c831da5 draft
Uploaded
| author | insilico-bob |
|---|---|
| date | Fri, 06 Jan 2017 16:11:47 -0500 |
| parents | 1abdad49a3ec |
| children | a5be88c495b6 |
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--- a/tool_dependencies.xml Fri Jan 06 15:57:48 2017 -0500 +++ b/tool_dependencies.xml Fri Jan 06 16:11:47 2017 -0500 @@ -2,12 +2,12 @@ <!-- https://wiki.galaxyproject.org/ToolDependenciesTagSets --> <actions> <action type="shell_command">echo 'starting tool dependency script'</action> - <action type="change_directory">/shed_tools/toolshed.g2.bx.psu.edu/repos/insilico-bob/ngchm_dependencies/*/ngchm_dependencies/</action> - <action type="chmod"><file mode="755">./mda_heatmap_viz/*</file></action> + <action type="change_directory">/shed_tools/toolshed.g2.bx.psu.edu/repos/insilico-bob/ngchm/*/ngchm/</action> + <action type="chmod"><file mode="755">./MDAHeatmap/*</file></action> <!--##### Place MDA software in Tools and Visualization directories ##### --> <action type="shell_command">echo 'Place MD Anderson test input and output files in ~/test-data directory'</action> <action type="shell_command">mkdir $GALAXY_ROOT/config/plugins/visualizations/mda_heatmap_viz/</action> - <action type="move_directory_files"><source_directory>./mda_heatmap_viz/</source_directory><destination_directory>$GALAXY_ROOT/config/plugins/visualizations/mda_heatmap_viz/</destination_directory></action> + <action type="move_directory_files"><source_directory>./MDAHeatmap/</source_directory><destination_directory>$GALAXY_ROOT/config/plugins/visualizations/mda_heatmap_viz/</destination_directory></action> <!-- ##### Place MD Anderson test input and output files in ~/test-data directory ##### --> <action type="shell_command">echo 'Place MD Anderson software in test data directories'</action> <action type="move_directory_files"><source_directory>./TestFiles/</source_directory><destination_directory>$GALAXY_ROOT/test-data/</destination_directory></action>