Mercurial > repos > insilico-bob > ngchm_dependencies
changeset 3:715e125409e2 draft
Uploaded
| author | insilico-bob |
|---|---|
| date | Fri, 30 Dec 2016 12:44:38 -0500 |
| parents | db0f44260207 |
| children | d3d47c77ec79 |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 12 insertions(+), 8 deletions(-) [+] |
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--- a/tool_dependencies.xml Tue Dec 27 14:27:37 2016 -0500 +++ b/tool_dependencies.xml Fri Dec 30 12:44:38 2016 -0500 @@ -1,17 +1,21 @@ <?xml version="1.0"?> <tool_dependency> - <package name="ngchm_dependencies" version="1.2"> - <install version="1.2"> - <actions> + <package name="ngchm" version="1.2"> + <install version="1.0"> + <actions> + <action type="shell_command">cd $GALAXY_ROOT_DIR</action> + <action type="shell_command">hg clone https://insilico-bob@toolshed.g2.bx.psu.edu/repos/insilico-bob/ngchm</action> + <action type="shell_command">mkdir -p -m 777 $GALAXY_ROOT_DIR/test-data/MDAheatmap</action> <action type="move_directory_files"> - <source>$INSTALL_DIR/MDAheatmap</source> - <destination>$GALAXY_ROOT_DIR/config/plugins/visualizations/MDAheatmap</destination> + <source_directory>./TestFiles</source_directory> + <destination_directory>$GALAXY_ROOT_DIR/test-data/MDAheatmap</destination_directory> </action> + <action type="shell_command">mkdir -p -m 777 $GALAXY_ROOT_DIR/config/plugins/visualizations/MDAheatmap/</action> <action type="move_directory_files"> - <source>$INSTALL_DIR/TestFiles</source> - <destination>$GALAXY_ROOT_DIR/test-data/MDAheatmap</destination> + <source_directory>./MDAheatmap/</source_directory> + <destination_directory>$GALAXY_ROOT_DIR/config/plugins/visualizations/MDAheatmap/</destination_directory> </action> - <action type="shell_command">cd $GALAXY_ROOT_DIR/templates/MDAheatmap/templates</action> + <action type="shell_command">cd $GALAXY_ROOT_DIR/config/plugins/visualizations/MDAheatmap/templates</action> <action type="shell_command">make</action> </actions> </install>