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1 <display id="proteomics_pepxml" version="1.0.0" name="view pepXML in">
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2 <dynamic_links from_file="tool-data/protk_display_site.txt" skip_startswith="#" id="0" name="0">
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3 <!-- Define parameters by column from file -->
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4 <dynamic_param name="site_id" value="0"/>
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5 <dynamic_param name="site_url" value="1"/>
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6 <!-- We define url and params as normal, but values defined in dynamic_param are available by specified name -->
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7 <url target_frame="galaxy_main">${site_url}/init_local?file=${encoded_filename.qp}&type=pepxml</url>
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8 <param type="data" name="pep_file" viewable="False" format="pepXML"/>
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9 <param type="data" dataset="pep_file" name="pepxml_file" format="pepXML" viewable="False" />
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10 <param type="template" name="encoded_filename" strip="True" >
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11 #import binascii
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12 ${binascii.hexlify( $pepxml_file.file_name )}
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13 </param>
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14 <param type="template" name="galaxy_url" strip="True" >
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15 ${BASE_URL.split(":")[1][2:]}
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16 </param>
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17 </dynamic_links>
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18 </display>
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