annotate test-data/test-db/taxgroup.tab @ 0:a968af0a91f9 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
author iuc
date Fri, 26 May 2023 09:19:12 +0000
parents
children 7844dbe4f8e2
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a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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1 #taxgroup gpipe_taxgroup number_of_nucl_ref_genes
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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2 Acinetobacter_baumannii Acinetobacter 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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3 Burkholderia_cepacia Burkholderia_cepacia_complex 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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4 Burkholderia_pseudomallei Burkholderia_pseudomallei 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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5 Campylobacter Campylobacter 2
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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6 Citrobacter_freundii Citrobacter_freundii 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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7 Clostridioides_difficile Clostridioides_difficile 1
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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8 Enterobacter_cloacae Enterobacter_cloacae 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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9 Enterococcus_faecalis Enterococcus_faecalis 1
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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10 Enterococcus_faecium Enterococcus_faecium 1
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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11 Escherichia Escherichia_coli_Shigella 5
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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12 Klebsiella_aerogenes Klebsiella 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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13 Klebsiella_oxytoca Klebsiella_oxytoca 1
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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14 Klebsiella_pneumoniae Klebsiella 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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15 Neisseria_gonorrhoeae Neisseria_gonorrhoeae 6
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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16 Neisseria_meningitidis Neisseria_meningitidis 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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17 Pseudomonas_aeruginosa Pseudomonas_aeruginosa 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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18 Salmonella Salmonella 1
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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19 Serratia_marcescens Serratia 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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20 Staphylococcus_aureus Staphylococcus_aureus 2
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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21 Staphylococcus_pseudintermedius Staphylococcus_pseudintermedius 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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22 Streptococcus_agalactiae Streptococcus_agalactiae 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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23 Streptococcus_pneumoniae Streptococcus_pneumoniae 1
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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24 Streptococcus_pyogenes Streptococcus_pyogenes 0
a968af0a91f9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
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25 Vibrio_cholerae Vibrio_cholerae 0