Mercurial > repos > iuc > arriba_get_filters
changeset 7:6d1f577b3e47 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/arriba commit 2d69e621036bf155e02189d4a9a8aa9ee24536e0
| author | iuc |
|---|---|
| date | Fri, 04 Apr 2025 10:38:06 +0000 |
| parents | 7a5a2d28c539 |
| children | |
| files | arriba_get_filters.xml macros.xml |
| diffstat | 2 files changed, 8 insertions(+), 4 deletions(-) [+] |
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--- a/arriba_get_filters.xml Wed Sep 25 15:30:03 2024 +0000 +++ b/arriba_get_filters.xml Fri Apr 04 10:38:06 2025 +0000 @@ -65,8 +65,8 @@ - cytobands -.. _Arriba: https://arriba.readthedocs.io/en/latest/ -.. _input_files: https://arriba.readthedocs.io/en/latest/input-files/ +.. _Arriba: https://github.com/suhrig/arriba/wiki/01-Home +.. _input_files: https://github.com/suhrig/arriba/wiki/04-Input-files ]]></help> <expand macro="citations" />
--- a/macros.xml Wed Sep 25 15:30:03 2024 +0000 +++ b/macros.xml Fri Apr 04 10:38:06 2025 +0000 @@ -1,6 +1,6 @@ <macros> - <token name="@TOOL_VERSION@">2.4.0</token> - <token name="@VERSION_SUFFIX@">2</token> + <token name="@TOOL_VERSION@">2.5.0</token> + <token name="@VERSION_SUFFIX@">0</token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">arriba</requirement> @@ -238,6 +238,7 @@ </help> <validator type="regex" message="">^\d+(,\d+)?$</validator> </param> + <param argument="--plotPanels" type="boolean" label="Plot panels" truevalue="TRUE" falsevalue="FALSE" help="The output will contain a panel for each fusion partner"/> </section> </xml> <token name="@DRAW_FUSIONS@"> @@ -301,5 +302,8 @@ #if str($visualization.options.fontSize) --fontSize=$visualization.options.fontSize #end if + #if $visualization.options.plotPanels + --plotPanels=$visualization.options.plotPanels + #end if </token> </macros>