Mercurial > repos > iuc > bakta
comparison test-data/TEST_2/TEST_2.log @ 1:da5f1924bb2e draft
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 0ef6e6b2dcc9a41b32741368a60b931f31934686
| author | iuc |
|---|---|
| date | Fri, 16 Sep 2022 13:42:15 +0000 |
| parents | 1a27ad3d0cdf |
| children | 865ece5ca178 |
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| 0:1a27ad3d0cdf | 1:da5f1924bb2e |
|---|---|
| 24 lookup annotations... | 24 lookup annotations... |
| 25 conduct expert systems... | 25 conduct expert systems... |
| 26 amrfinder: 0 | 26 amrfinder: 0 |
| 27 protein sequences: 0 | 27 protein sequences: 0 |
| 28 combine annotations and mark hypotheticals... | 28 combine annotations and mark hypotheticals... |
| 29 analyze hypothetical proteins: 2 | 29 detect pseudogenes... |
| 30 pseudogene candidates: 0 | |
| 31 found pseudogenes: 0 | |
| 32 analyze hypothetical proteins: 2 | |
| 30 detected Pfam hits: 0 | 33 detected Pfam hits: 0 |
| 31 calculated proteins statistics | 34 calculated proteins statistics |
| 32 revise special cases... | 35 revise special cases... |
| 33 extract sORF... | 36 extract sORF... |
| 34 potential: 22 | 37 potential: 22 |
| 64 ncRNAs: 0 | 67 ncRNAs: 0 |
| 65 ncRNA regions: 0 | 68 ncRNA regions: 0 |
| 66 CRISPR arrays: 0 | 69 CRISPR arrays: 0 |
| 67 CDSs: 2 | 70 CDSs: 2 |
| 68 hypotheticals: 2 | 71 hypotheticals: 2 |
| 72 pseudogenes: 0 | |
| 69 signal peptides: 0 | 73 signal peptides: 0 |
| 70 sORFs: 0 | 74 sORFs: 0 |
| 71 gaps: 0 | 75 gaps: 0 |
| 72 oriCs/oriVs: 0 | 76 oriCs/oriVs: 0 |
| 73 oriTs: 0 | 77 oriTs: 0 |
| 74 | 78 |
| 75 export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/4/working | 79 export annotation results to: /tmp/tmpmnqj1xog/job_working_directory/000/4/working |
| 76 human readable TSV... | 80 human readable TSV... |
| 77 GFF3... | 81 GFF3... |
| 78 INSDC GenBank & EMBL... | 82 INSDC GenBank & EMBL... |
| 79 genome sequences... | 83 genome sequences... |
| 80 feature nucleotide sequences... | 84 feature nucleotide sequences... |