Mercurial > repos > iuc > bedtools

diff bedpeToBam.xml @ 43:07e8b80f278c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
author iuc
date Fri, 01 Apr 2022 19:02:51 +0000
parents 7ab85ac5f64b
children 64e2edfe7a2c
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line diff
--- a/bedpeToBam.xml	Wed Jan 12 19:22:14 2022 +0000
+++ b/bedpeToBam.xml	Fri Apr 01 19:02:51 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="bedtools_bedpetobam" name="bedtools BEDPE to BAM" version="@TOOL_VERSION@" profile="@PROFILE@">
+<tool id="bedtools_bedpetobam" name="bedtools BEDPE to BAM" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
     <description>converter</description>
     <macros>
         <import>macros.xml</import>
@@ -13,7 +13,7 @@
 bedtools bedpetobam
 -mapq $mapq
 -i '$input'
--g @GENOME_FILE@
+@GENOME_FILE@
 > '$output'
     ]]></command>
     <inputs>