Mercurial > repos > iuc > bedtools
view tool-data/dbkeys.loc.sample @ 32:4f7a5ccd2ae9 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit fc3616bd1463afef9681cd7c431ac29f79e37e74
author | iuc |
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date | Tue, 11 Dec 2018 14:01:26 -0500 |
parents | 44867b59dbf2 |
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#This file lists the locations and dbkeys of all the genome files #See here for details: http://bedtools.readthedocs.io/en/latest/content/general-usage.html#genome-file-format #You can add elements to this data table using the data_manager_fetch_genome_dbkeys_all_fasta data manager. #Alternatively, index files created using samtools faidx (http://www.htslib.org/doc/faidx.html) contain 3 extra columns, but work fine. #This file has the format (white space characters are TAB characters): # #<dbkey> <display_name> <file_path> # #So, dbkeys.loc could look something like this: # #apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/genome/apiMel3/apiMel3.len #hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.len #