Mercurial > repos > iuc > bedtools
view spacingBed.xml @ 33:87ee588b3d45 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 0a8cabcc8f00014789b6d30e90be1b949d4e94d2
author | iuc |
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date | Mon, 17 Dec 2018 14:23:31 -0500 |
parents | 4f7a5ccd2ae9 |
children | dde39ba9c031 |
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<tool id="bedtools_spacingbed" name="bedtools SpacingBed" version="@WRAPPER_VERSION@"> <description>reports the distances between features</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <expand macro="stdio" /> <command> <![CDATA[ bedtools spacing -i '$input' > '$output' ]]> </command> <inputs> <param format="bam,@STD_BEDTOOLS_INPUTS@" name="input" type="data" label="@STD_BEDTOOLS_INPUT_LABEL@/BAM file"/> </inputs> <outputs> <data format_source="input" name="output" metadata_source="input" label="Spaces between intervals of ${input}"/> </outputs> <tests> <test> <param name="input" value="a.bed" ftype="bed" /> <output name="output" file="spacingBed_result1.bed" ftype="bed" /> </test> </tests> <help> <![CDATA[ **What it does** Report the spacing between intervals in a file. @REFERENCES@ ]]> </help> <expand macro="citations" /> </tool>