Mercurial > repos > iuc > biom_add_metadata
diff biom_add_metadata.xml @ 8:6ef0b5664c69 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/biom_format commit 4d77c1e4bd9f6876ee338858a8cd4c7e9528d54c
| author | iuc |
|---|---|
| date | Wed, 13 Sep 2023 18:53:16 +0000 |
| parents | a3b86937ead6 |
| children | 3b6f97e7094c |
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--- a/biom_add_metadata.xml Sat Jan 21 11:16:40 2023 +0000 +++ b/biom_add_metadata.xml Wed Sep 13 18:53:16 2023 +0000 @@ -38,16 +38,16 @@ ]]> </command> <inputs> - <param name="input_fp" argument="--input-fp" type="data" format="biom1" label="BIOM File"/> - <param name="sample_metadata_fp" argument="--sample-metadata-fp" type="data" format="tabular" optional="True" label="Sample Metadata Tabular File" /> - <param name="observation_metadata_fp" argument="--observation-metadata-fp" type="data" format="tabular" optional="True" label="Observation Metadata Tabular File"/> - <param name="sc_separated" argument="--sc-separated" type="text" value="" label="Comma-separated list of the metadata fields to split on semicolons" /> - <param name="sc_pipe_separated" argument="--sc-pipe-separated" type="text" value="" label="Comma-separated list of the metadata fields to split on semicolons and pipes (|)"/> - <param name="int_fields" argument="--int-fields" type="text" value="" label="Comma-separated list of the metadata fields to cast to integers" /> - <param name="float_fields" argument="--float-fields" type="text" value="" label="Comma-separated list of the metadata fields to cast to floating point numbers" /> - <param name="sample_header" argument="--sample-header" type="text" value="" label="Comma-separated list of the sample metadata field names" /> - <param name="observation_header" argument="--observation-header" type="text" value="" label="Comma-separated list of the observation metadata field names" /> - <param name="output_as_json" argument="--output-as-json" type="boolean" checked="True" truevalue="--output-as-json" falsevalue="" label="Write the output file in JSON format (biom1)" /> + <param argument="--input-fp" type="data" format="biom1" label="BIOM File"/> + <param argument="--sample-metadata-fp" type="data" format="tabular" optional="True" label="Sample Metadata Tabular File" /> + <param argument="--observation-metadata-fp" type="data" format="tabular" optional="True" label="Observation Metadata Tabular File"/> + <param argument="--sc-separated" type="text" value="" label="Comma-separated list of the metadata fields to split on semicolons" /> + <param argument="--sc-pipe-separated" type="text" value="" label="Comma-separated list of the metadata fields to split on semicolons and pipes (|)"/> + <param argument="--int-fields" type="text" value="" label="Comma-separated list of the metadata fields to cast to integers" /> + <param argument="--float-fields" type="text" value="" label="Comma-separated list of the metadata fields to cast to floating point numbers" /> + <param argument="--sample-header" type="text" value="" label="Comma-separated list of the sample metadata field names" /> + <param argument="--observation-header" type="text" value="" label="Comma-separated list of the observation metadata field names" /> + <param argument="--output-as-json" type="boolean" checked="True" truevalue="--output-as-json" falsevalue="" label="Write the output file in JSON format (biom1)" /> </inputs> <outputs> <data format="biom1" name="output_fp">