Mercurial > repos > iuc > busco
diff test-data/genome_results/short_summary_cached @ 18:94170eee0ad8 draft
planemo upload commit 09dff03131fb917a00cc291580ed7c4f38b266c9
author | iuc |
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date | Fri, 14 Apr 2023 08:13:46 +0000 |
parents | |
children | 2a5b8b9936bf |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/genome_results/short_summary_cached Fri Apr 14 08:13:46 2023 +0000 @@ -0,0 +1,30 @@ +# BUSCO version is: 5.4.6 +# The lineage dataset is: archaea_odb10 (Creation date: 2021-02-23, number of genomes: 404, number of BUSCOs: 194) +# Summarized benchmarking in BUSCO notation for file /tmp/tmpte_du6dt/files/000/dataset_1.dat +# BUSCO was run in mode: prok_genome +# Gene predictor used: prodigal + + ***** Results: ***** + + C:0.0%[S:0.0%,D:0.0%],F:0.0%,M:100.0%,n:194 + 0 Complete BUSCOs (C) + 0 Complete and single-copy BUSCOs (S) + 0 Complete and duplicated BUSCOs (D) + 0 Fragmented BUSCOs (F) + 194 Missing BUSCOs (M) + 194 Total BUSCO groups searched + +Assembly Statistics: + 1 Number of scaffolds + 1 Number of contigs + 62370 Total length + 0.000% Percent gaps + 62 KB Scaffold N50 + 62 KB Contigs N50 + + +Dependencies and versions: + hmmsearch: 3.1 + bbtools: 39.01 + prodigal: 2.6.3 + busco: 5.4.6