diff test-data/genome_results/short_summary @ 20:ea8146ee148f draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 9bf18dbcef34a48d3c40150ee953706bececfdd1
author iuc
date Mon, 18 Mar 2024 16:01:49 +0000
parents 2a5b8b9936bf
children
line wrap: on
line diff
--- a/test-data/genome_results/short_summary	Tue Nov 14 13:03:37 2023 +0000
+++ b/test-data/genome_results/short_summary	Mon Mar 18 16:01:49 2024 +0000
@@ -1,35 +1,35 @@
-# BUSCO version is: 5.5.0 
-# The lineage dataset is: arthropoda_odb10 (Creation date: 2020-09-10, number of genomes: 90, number of BUSCOs: 1013)
-# Summarized benchmarking in BUSCO notation for file /tmp/tmpbmq1q2c6/files/8/e/b/dataset_8eb218b1-f367-4315-9915-554c009808cb.dat
+# BUSCO version is: 5\.5\.0 
+# The lineage dataset is: arthropoda_odb10 \(Creation date: [0-9]{4}-[0-9]{2}-[0-9]{2}, number of genomes: 90, number of BUSCOs: 1013\)
+# Summarized benchmarking in BUSCO notation for file [a-z0-9_\-/\.]+
 # BUSCO was run in mode: euk_genome_aug
 # Gene predictor used: augustus
 
-	***** Results: *****
+	\*\*\*\*\* Results: \*\*\*\*\*
 
-	C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013	   
-	1	Complete BUSCOs (C)			   
-	1	Complete and single-copy BUSCOs (S)	   
-	0	Complete and duplicated BUSCOs (D)	   
-	0	Fragmented BUSCOs (F)			   
-	1012	Missing BUSCOs (M)			   
+	C:0\.1%\[S:0\.1%,D:0\.0%\],F:0\.0%,M:99\.9%,n:1013	   
+	1	Complete BUSCOs \(C\)			   
+	1	Complete and single-copy BUSCOs \(S\)	   
+	0	Complete and duplicated BUSCOs \(D\)	   
+	0	Fragmented BUSCOs \(F\)			   
+	1012	Missing BUSCOs \(M\)			   
 	1013	Total BUSCO groups searched		   
 
 Assembly Statistics:
 	1	Number of scaffolds
 	1	Number of contigs
 	62370	Total length
-	0.000%	Percent gaps
+	0\.000%	Percent gaps
 	62 KB	Scaffold N50
 	62 KB	Contigs N50
 
 
 Dependencies and versions:
-	hmmsearch: 3.1
-	bbtools: 39.01
-	makeblastdb: 2.14.0+
-	tblastn: 2.14.0+
-	augustus: 3.5.0
-	gff2gbSmallDNA.pl: None
-	new_species.pl: None
+	hmmsearch: [0-9\.\+]+
+	bbtools: [0-9\.\+]+
+	makeblastdb: [0-9\.\+]+
+	tblastn: [0-9\.\+]+
+	augustus: [0-9\.\+]+
+	gff2gbSmallDNA\.pl: None
+	new_species\.pl: None
 	etraining: None
-	busco: 5.5.0
+	busco: [0-9\.\+]+