Mercurial > repos > iuc > bwameth
changeset 2:2e4674c16615 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tools/bwameth commit 10747839851e862ba0200061e1c99d68e009fb18
author | iuc |
---|---|
date | Sun, 12 Mar 2017 04:11:22 -0400 |
parents | 404fae08ea31 |
children | a6ea26c1f225 |
files | bwameth.xml |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/bwameth.xml Wed Dec 21 17:49:54 2016 -0500 +++ b/bwameth.xml Sun Mar 12 04:11:22 2017 -0400 @@ -31,7 +31,7 @@ #else: $single_or_paired.input_mate1.forward $single_or_paired.input_mate1.reverse #end if - | samtools view -u - | samtools sort -@ "\${GALAXY_SLOTS:-4}" -o output.bam - + | samtools view -u - | samtools sort -@ "\${GALAXY_SLOTS:-4}" -T tmp -O bam -o output.bam - ]]> </command> <inputs>