Mercurial > repos > iuc > checkm2
diff tool-data/checkm2.loc.sample @ 0:0f5f7fa9c08f draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/main/tools/checkm2/ commit 043f6bb449b27287b413a937b21d918569cfdad7
author | iuc |
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date | Sun, 19 Jan 2025 18:48:22 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/checkm2.loc.sample Sun Jan 19 18:48:22 2025 +0000 @@ -0,0 +1,18 @@ +#This is a sample file distributed with Galaxy that enables tools +#to use a the checkm2 dabase. +#You will need to create these data files using the following command + +#checkm2 database --download --path /custom/path/ + +#and then create a checkm2_db_versioned.loc file similar to this one (store it in this +#directory) that points to the directories in which those files are stored. + +#The checkm2_db_versioned.loc file has this format (longer white space +#characters are TAB characters): +# +#<unique_build_id> <dbkey> <display_name> <version> <file_base_path> + +#The <version> column indicates the checkm2 version that generated the database + +# +#diamond_db_1.0.2 1.0.2 Diamond database 1.0.2 /mnt/galaxyIndices/Checkm2_database/uniref100.KO.1.dmnd