Mercurial > repos > iuc > cherri_eval

annotate test-data/train_1_pos.tabular @ 0:7c6c282ecf5a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
author iuc
date Fri, 09 Dec 2022 17:40:27 +0000
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7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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1 383 chr1 0 23 + chr2 1 24 - GUUGCGGCUGGACGAGGCGCAGU CCCAGCGGGGCUGGGCGCGCGGA .((((((((.(.(....(((...&....)))..).).))).))))). -14.5 UUGCGGCUGGACGAGGCGC GCGGGGCUGGGCGCGCGG 2&5 chr1 1 19 + chr2 5 19 - 489.80 3308.00 3797.8 1.0 1.0 1.0 CDS miRNA ENST00000624358;ENST00000651965 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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2 164 chr1 23 42 - chr2 24 47 - GGCCGCGGCGCGAGCCGGG CCCAGCGGGGCUGGGCGCGCGGA ..(((((((.(.(((((((&))).....)))).))).))))). -23.9 CCGCGGCGCGAGCCGGG CCCAGCGGGGCUGGGCGCGCGG 3&1 chr1 25 40 - chr2 24 46 - 219.80 3308.00 3527.8 1.0 1.0 1.0 protein_coding miRNA ENST00000257765;ENST00000423730;ENST00000433730;ENST00000610435 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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3 141 chr1 42 90 + chr2 47 97 + GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCGGUGCCG CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCCGUGGC (((((((.(((((.((.((((((((((.((((((((((((((......&)))))).))).)))))..)))))))))))).)))).).)))))))..... -74.1 GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCG CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCC 1&1 chr1 42 84 + chr2 47 92 + 84.07 73.88 157.95 1.0 1.0 1.0 miRNA miRNA ENST00000615959 ENST00000581792
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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4 141 chr1 90 140 + chr2 97 145 + CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCCGUGGC GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCGGUGCCG ((((((.(((.(((((..((((((((((((.((((.(.(((((((.....&))))))).))))).)).)))))))))).))))))))))))))...... -74.1 CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCC GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCG 1&1 chr1 90 135 + chr2 97 139 + 73.88 84.07 157.95 1.0 1.0 1.0 miRNA miRNA ENST00000615959 ENST00000615959
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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5 141 chr1 140 188 + chr2 145 195 + GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCGGUGCCG CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCCGUGGC (((((((.(((((.((.((((((((((.((((((((((((((......&)))))).))).)))))..)))))))))))).)))).).)))))))..... -74.1 GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCG CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCC 1&1 chr1 140 182 + chr2 145 190 + 84.07 73.88 157.95 1.0 1.0 1.0 miRNA miRNA ENST00000581792 ENST00000615959
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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6 141 chr1 188 238 + chr2 195 243 + CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCCGUGGC GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCGGUGCCG ((((((.(((.(((((..((((((((((((.((((.(.(((((((.....&))))))).))))).)).)))))))))).))))))))))))))...... -74.1 CGCGCGUGUGUCCCGGCUGCGGUCGGCCGCGCUCGAGGGGUCCCC GGGGAUCGCCGAGGGCCGGUCGGCCGCCCCGGGUGCCGCGCG 1&1 chr1 188 233 + chr2 195 237 + 73.88 84.07 157.95 1.0 1.0 1.0 miRNA miRNA ENST00000581792 ENST00000581792
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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7 134 chr1 238 263 - chr2 243 292 + ACUGGUGAAGAGACAUGAGAGGAUG GGUGAGGCGGGGGGGCGAGCCCUGAGGGGCUCUCGCUUCUGGCGCCAAG ..(((((.((((...((((((....&.............................)))))).))))..))))).. -17 UGGUGAAGAGACAUGAGAG CUCUCGCUUCUGGCGCCA 3&30 chr1 240 257 - chr2 272 261 + 2216.00 1579.00 3795.0 1.0 1.0 1.0 lncRNA miRNA ENST00000667915 ENST00000611066
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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8 131 chr1 263 285 + chr2 292 315 - GGCGCGCGCCGGGCCCGUGCCG CCCAGCGGGGCUGGGCGCGCGGA ..((((((((.(((((.(((..&....)))))))).)))))))).. -35.6 CGCGCGCCGGGCCCGUGC GCGGGGCUGGGCGCGCG 3&5 chr1 265 281 + chr2 296 309 - 161.60 3308.00 3469.6 1.0 0.84 0.84 CDS miRNA ENST00000369800;ENST00000522853 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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9 92 chr1 285 305 - chr2 315 338 + UUCCCUCCUCCUCCUCCCCU GUAGGGGGCGGGCUCCGGCGCUG ..(((.((((((.(......&).)))))).)))........... -15.3 CCCUCCUCCUCC GUAGGGGGCGGG 3&1 chr1 287 297 - chr2 315 327 + 124.00 5122.00 5246.0 1.0 1.0 1.0 lncRNA miRNA ENST00000607278 ENST00000577388
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
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10 75 chr1 305 323 - chr2 338 361 - GCCGCGGCGAGCCGGGCC CCCAGCGGGGCUGGGCGCGCGGA .(((((.(..(((.((((&........)))).))))))))). -22.4 CCGCGGCGAGCCGGGCC GGCUGGGCGCGCGG 2&9 chr1 306 322 - chr2 346 352 - 104.40 3308.00 3412.4 1.0 1.0 1.0 protein_coding miRNA ENST00000371984 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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11 72 chr1 323 341 + chr2 361 384 - CUGGGGGCCCUUCCCGUG CCCAGCGGGGCUGGGCGCGCGGA (((.(.((((.((((((.&....))))))..)))).).))). -25.7 CUGGGGGCCCUUCCCGU GCGGGGCUGGGCGCGCGG 1&5 chr1 323 340 + chr2 365 379 - 99.15 3308.00 3407.15 1.0 0.84 0.84 lncRNA miRNA ENST00000609544 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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12 66 chr1 341 359 + chr2 384 407 - CGCGGGCGAGCCGGGCCC CCCAGCGGGGCUGGGCGCGCGGA .....(((.(((.(((((&.......))))).))).)))... -23.6 GCGAGCCGGGCCC GGGCUGGGCGCGC 6&8 chr1 346 354 + chr2 391 397 - 99.15 3308.00 3407.15 1.0 0.84 0.84 CDS miRNA ENST00000270458 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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13 64 chr1 359 401 - chr2 407 430 - GAUGCCUUCCCCGUCCGUCCGUCCGUCCGUCCAUCCGUCCAC CCCAGCGGGGCUGGGCGCGCGGA .................(((((.((((((.((..((((....&....)))))).)))))).))))) -23.8 UCCGUCCGUCCGUCCAUCCGU GCGGGGCUGGGCGCGCGGA 18&5 chr1 376 380 - chr2 411 426 - 19720.00 3308.00 23028.0 1.0 0.84 0.84 protein_coding miRNA ENST00000356861;ENST00000425528;ENST00000450764;ENST00000589149 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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14 51 chr1 401 419 + chr2 430 491 + CCCCGGGCCGGGCACCGC CGCGCGUGCGCCCGAGCGCGGCCCGGUGGUCCCUCCCGGACAGGCGUUCGUGCGACGUGUG (((((((((((((.((((&...))).).))))......))))))).))................................ -29.9 CCCCGGGCCGGGCACCGC GCGUGCGCCCGAGCGCGGCCCGGUGG 1&4 chr1 401 419 + chr2 433 456 + 88.57 68.87 157.44 1.0 1.0 1.0 protein_coding miRNA ENST00000343605 ENST00000614492
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
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15 51 chr1 419 437 + chr2 491 552 + CCCCGGGCCGGGCACCGC CGCGCGUGCGCCCGAGCGCGGCCCGGUGGUCCCUCCCGGACAGGCGUUCGUGCGACGUGUG (((((((((((((.((((&...))).).))))......))))))).))................................ -29.9 CCCCGGGCCGGGCACCGC GCGUGCGCCCGAGCGCGGCCCGGUGG 1&4 chr1 419 437 + chr2 494 517 + 88.57 68.87 157.44 1.0 1.0 1.0 protein_coding miRNA ENST00000343605 ENST00000577708
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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16 37 chr1 437 590 + chr2 552 575 - GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG CCCAGCGGGGCUGGGCGCGCGGA .......................................................................................................(((.(.(.((((((((..........(((.....................&)))..)))))))).).).))).. -26.5 CGCACUUGCGGCCCCGGGUUCCUCCCGGG CCCAGCGGGGCUGGGCGCGCG 104&1 chr1 540 466 + chr2 552 573 - 10440.00 3308.00 13748.0 1.0 0.84 0.84 rRNA miRNA ENST00000612463 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
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17 37 chr1 590 743 + chr2 575 598 - GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG CCCAGCGGGGCUGGGCGCGCGGA .......................................................................................................(((.(.(.((((((((..........(((.....................&)))..)))))))).).).))).. -26.5 CGCACUUGCGGCCCCGGGUUCCUCCCGGG CCCAGCGGGGCUGGGCGCGCG 104&1 chr1 693 619 + chr2 575 596 - 10440.00 3308.00 13748.0 1.0 0.84 0.84 rRNA miRNA ENST00000610460 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
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18 37 chr1 743 896 + chr2 598 621 - GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG CCCAGCGGGGCUGGGCGCGCGGA .......................................................................................................(((.(.(.((((((((..........(((.....................&)))..)))))))).).).))).. -26.5 CGCACUUGCGGCCCCGGGUUCCUCCCGGG CCCAGCGGGGCUGGGCGCGCG 104&1 chr1 846 772 + chr2 598 619 - 10440.00 3308.00 13748.0 1.0 0.84 0.84 rRNA miRNA ENST00000613359 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
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19 37 chr1 896 1049 + chr2 621 644 - GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG CCCAGCGGGGCUGGGCGCGCGGA .......................................................................................................(((.(.(.((((((((..........(((.....................&)))..)))))))).).).))).. -26.5 CGCACUUGCGGCCCCGGGUUCCUCCCGGG CCCAGCGGGGCUGGGCGCGCG 104&1 chr1 999 925 + chr2 621 642 - 10440.00 3308.00 13748.0 1.0 0.84 0.84 rRNA miRNA ENST00000619471 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
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20 37 chr1 1049 1202 + chr2 644 667 - NA NA NA NA NA NA NA chr1 1049 1202 + chr2 644 667 - 10440.00 3308.00 13748.0 1.0 0.84 0.84 rRNA miRNA ENST00000611446 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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21 37 chr1 1202 1355 + chr2 667 690 - NA NA NA NA NA NA NA chr1 1202 1355 + chr2 667 690 - 10440.00 3308.00 13748.0 1.0 0.84 0.84 rRNA miRNA ENST00000619779 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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22 37 chr1 1355 1508 + chr2 690 713 - NA NA NA NA NA NA NA chr1 1355 1508 + chr2 690 713 - 10440.00 3308.00 13748.0 1.0 0.84 0.84 rRNA miRNA ENST00000616292 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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23 37 chr1 1508 1661 + chr2 713 736 - NA NA NA NA NA NA NA chr1 1508 1661 + chr2 713 736 - 10440.00 3308.00 13748.0 1.0 0.84 0.84 rRNA miRNA ENST00000618998 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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24 36 chr1 1661 1679 + chr2 736 759 - GGACGGGCCCUUCCCGUG CCCAGCGGGGCUGGGCGCGCGGA .(.((.((((.((((((.&....))))))..)))).)))... -22.5 GACGGGCCCUUCCCGU GCGGGGCUGGGCGCGC 2&5 chr1 1662 1677 + chr2 740 752 - 50.24 3308.00 3358.24 1.0 0.84 0.84 CDS miRNA ENST00000305943 ENST00000584178
7c6c282ecf5a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cherri commit f9348123725f421ddbdbd8d372d038da4880dbac
iuc
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25 32 chr1 1679 1697 - chr2 759 782 - GCGCUGCGCGAGCCGGGC CCCAGCGGGGCUGGGCGCGCGGA ...((((((..(((.(((&.........))).))))))))). -20.7 CUGCGCGAGCCGGGC GCUGGGCGCGCGG 4&10 chr1 1682 1694 - chr2 768 772 - 43.63 3308.00 3351.63 1.0 1.0 1.0 CDS miRNA ENST00000269503;ENST00000585159 ENST00000584178