Mercurial > repos > iuc > chira_quantify

diff chira_quantify.xml @ 13:21e2f5f97f5d draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/chira commit baafc05b1428cf0ec56a5171c41f2d429a0e0f96"
author iuc
date Thu, 13 Aug 2020 02:42:15 -0400
parents e0f08a05b24c
children 06ac35533793
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--- a/chira_quantify.xml	Thu Jul 02 08:55:00 2020 -0400
+++ b/chira_quantify.xml	Thu Aug 13 02:42:15 2020 -0400
@@ -25,7 +25,7 @@
                  Always set this value relative to your sequencing depth. Setting this to lower leads
                  CRLs of random multimappings Also consider setting the --crl_share option
                  along with this"/>
-       <param name="em_threshold" type="float" value="0.1" label="EM threshold"
+       <param name="em_threshold" type="float" value="0.00001" label="EM threshold"
               help="The maximum difference of transcripts expression between two consecutive iterations of EM algorithm to converge."/>
        <param name="crl" type="boolean" truevalue="-crl" falsevalue="" checked="true"
               label="Create CRLs" help="Create CRLs and qunatify them or use the loci further without creating the CRLs" />