Mercurial > repos > iuc > cnvkit_access

annotate test-data/ref-tas.cnn @ 1:9f18bcf53f92 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
author iuc
date Fri, 29 Sep 2023 15:43:42 +0000
parents 22878d2aff05
children
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22878d2aff05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit c35b83e4b65b211377c9f616c77d7306da48a984
iuc
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1 chromosome start end gene log2 depth spread
1
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
diff changeset
2 chrM 576 848 - 3.256 91.9926 4.82735
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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3 chrM 848 1121 - 0.884565 5.9011 1.31146
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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4 chrM 1121 1394 - -0.165367 1.4359 0.245173
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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5 chrM 1394 1667 - 0.909286 3.78022 1.34811
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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6 chrM 1667 1940 - 0 1.80586 0
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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7 chrM 1940 2212 - -2.82466 0.0404412 4.18784
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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8 chrM 2212 2485 - -0.0642305 1.65201 0.0952281
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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9 chrM 2485 2758 - 0.01695 4.0696 0.0251301
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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10 chrM 2758 3031 - -0.315323 0.717949 0.467498
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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11 chrM 3031 3304 - 0.157569 1.33333 0.233612
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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12 chrM 3306 3579 - -0.387402 0.626374 0.574362
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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13 chrM 3579 3853 - 0 2.30292 0
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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14 chrM 3853 4126 - 0.202715 2.74359 0.300545
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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15 chrM 4126 4400 - -0.259225 0.748175 0.384327
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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16 chrM 4401 4695 - -0.0877248 0.94898 0.130061
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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17 chrM 4695 4990 - 0.16791 5.01695 0.248943
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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18 chrM 4990 5284 - -0.25963 1.73129 0.384927
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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19 chrM 5284 5579 - 0.810516 5.97966 1.20167
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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20 chrM 5586 5655 - -10.4795 0 15.5369
0
22878d2aff05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit c35b83e4b65b211377c9f616c77d7306da48a984
iuc
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21 chrM 5656 5729 - 0 0 0
1
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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22 chrM 5760 5891 - 0.415822 1.79389 0.616498
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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23 chrM 5903 6171 - 0.131623 2.15299 0.195144
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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24 chrM 6171 6440 - 0 2.02974 0
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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25 chrM 6440 6708 - -0.0963015 1.51493 0.142777
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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26 chrM 6708 6977 - 0 2.03717 0
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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27 chrM 6977 7245 - 0.40989 3.05597 0.607703
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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28 chrM 7245 7514 - -0.047091 1.24907 0.0698171
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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29 chrM 7517 7767 - 0.271996 1.944 0.403261
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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30 chrM 7767 8018 - 0.07072 2.24701 0.104849
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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31 chrM 8018 8269 - -0.415822 1.00797 0.616498
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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32 chrM 8294 8364 - -10.0057 0 14.8345
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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33 chrM 8365 8630 - 0 1.0717 0
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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34 chrM 8630 8896 - 0.485791 2.07895 0.720233
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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35 chrM 8896 9162 - 0.280695 3.66165 0.416158
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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36 chrM 9162 9427 - 0.563397 3.60755 0.835292
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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37 chrM 9427 9693 - -0.195679 0.808271 0.290114
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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38 chrM 9693 9959 - 0 2.07143 0
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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39 chrM 9959 10224 - -4.10122 0.00377358 6.08048
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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40 chrM 10224 10490 - -0.248445 1.44361 0.368345
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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41 chrM 10490 10756 - -0.0920355 1.82331 0.136452
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
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42 chrM 10756 11022 - -0.51737 1.12406 0.767054
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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43 chrM 11022 11287 - 0.26621 4.27925 0.394683
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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44 chrM 11287 11553 - 0.350607 2.93609 0.519809
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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45 chrM 11553 11819 - -0.0341651 1.06015 0.0506531
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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46 chrM 11819 12084 - 0.590516 2.40377 0.875498
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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47 chrM 12084 12350 - -1.0261 0.736842 1.5213
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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48 chrM 12350 12616 - -0.64663 0.736842 0.958694
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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49 chrM 12616 12882 - 0.295587 2.48872 0.438237
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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50 chrM 12882 13147 - 0.50247 4.50943 0.744962
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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51 chrM 13147 13413 - -0.322016 1.47368 0.477422
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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52 chrM 13413 13679 - 0.356127 2.95865 0.527993
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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53 chrM 13679 13944 - -0.0012925 1.64906 0.00191626
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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54 chrM 13944 14210 - -0.865739 0.890977 1.28355
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
diff changeset
55 chrM 14210 14476 - -0.4233 2.21053 0.627585
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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56 chrM 14476 14742 - 0.598181 4.45489 0.886863
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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57 chrM 14746 14987 - 1.03347 8.14523 1.53222
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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58 chrM 14987 15228 - 0.355932 2.48133 0.527704
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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59 chrM 15228 15470 - 0 1.11157 0
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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60 chrM 15470 15711 - 0.393765 3.9751 0.583796
9f18bcf53f92 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit e927b17a345b18c1b51dc1b112db5129278dcd22
iuc
parents: 0
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61 chrM 15711 15953 - -0.312504 0.809917 0.463318
0
22878d2aff05 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit c35b83e4b65b211377c9f616c77d7306da48a984
iuc
parents:
diff changeset
62 chrM 15955 16023 - 0 0 0