Mercurial > repos > iuc > cnvkit_call
view test-data/tumor.cnr @ 3:ef7efbffb3ec draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit bced16a45d19b243a244a093c3b3504b2640d5e0
| author | iuc |
|---|---|
| date | Mon, 22 Apr 2024 17:41:43 +0000 |
| parents | 0a5e2fc51dfb |
| children |
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chromosome start end gene depth log2 weight chrM 848 1121 - 5.9011 1.10765 0.461544 chrM 1121 1394 - 1.4359 0.5119 0.42727 chrM 1394 1667 - 3.78022 1.00545 0.83803 chrM 1667 1940 - 1.80586 -0.141849 0.898961 chrM 2212 2485 - 1.65201 -0.341112 0.939111 chrM 2485 2758 - 4.0696 0.227416 0.0932326 chrM 2758 3031 - 0.717949 -0.74495 0.631914 chrM 3031 3304 - 1.33333 -0.242655 0.920093 chrM 3306 3579 - 0.626374 -1.60223 0.635989 chrM 3579 3853 - 2.30292 0.419897 0.823341 chrM 3853 4126 - 2.74359 0.492218 0.954299 chrM 4401 4695 - 0.94898 -0.75838 0.810217 chrM 4695 4990 - 5.01695 0.833877 0.745894 chrM 4990 5284 - 1.73129 -0.166905 0.52302 chrM 5284 5579 - 5.97966 1.47869 0.301566 chrM 5586 5655 - 0 -20.2111 0.909096 chrM 5656 5729 - 0 -19.9628 0.789733 chrM 5760 5891 - 1.79389 -0.439065 0.721317 chrM 5903 6171 - 2.15299 0.879609 0.881613 chrM 6171 6440 - 2.02974 -0.56855 0.540091 chrM 6440 6708 - 1.51493 -0.533208 0.953875 chrM 6708 6977 - 2.03717 0.010185 0.924831 chrM 6977 7245 - 3.05597 0.140146 0.861631 chrM 7517 7767 - 1.944 -0.010185 0.932072 chrM 8018 8269 - 1.00797 -0.730833 0.739629 chrM 8365 8630 - 1.0717 -0.175653 0.333588 chrM 8630 8896 - 2.07895 -0.906325 0.953701 chrM 8896 9162 - 3.66165 0.578937 0.922022 chrM 9162 9427 - 3.60755 0.713289 0.953614 chrM 9427 9693 - 0.808271 -0.874973 0.24358 chrM 9693 9959 - 2.07143 0.093785 0.870609 chrM 10490 10756 - 1.82331 0.051865 0.901124 chrM 10756 11022 - 1.12406 -0.367165 0.23713 chrM 11022 11287 - 4.27925 0.646415 0.94264 chrM 11287 11553 - 2.93609 0.0993253 0.941632 chrM 11553 11819 - 1.06015 -0.671504 0.923937 chrM 11819 12084 - 2.40377 -0.123249 0.829158 chrM 12084 12350 - 0.736842 -1.27337 0.953701 chrM 12350 12616 - 0.736842 -1.07369 0.953701 chrM 12616 12882 - 2.48872 -0.24473 0.918407 chrM 12882 13147 - 4.50943 0.330991 0.612262 chrM 13147 13413 - 1.47368 0.0980097 0.895383 chrM 13413 13679 - 2.95865 0.764085 0.898039 chrM 13679 13944 - 1.64906 0.200821 0.200719 chrM 13944 14210 - 0.890977 -1.20825 0.935464 chrM 14210 14476 - 2.21053 0.220457 0.911385 chrM 14987 15228 - 2.48133 0.0611491 0.887423 chrM 15228 15470 - 1.11157 -0.517988 0.95146 chrM 15470 15711 - 3.9751 0.858538 0.951359 chrM 15711 15953 - 0.809917 -0.698856 0.917254 chrM 15955 16023 - 0 -20.8746 0.88741