Mercurial > repos > iuc > colabfold_msa
comparison macros.xml @ 0:941f89a0c552 draft
planemo upload for repository https://github.com/sokrypton/ColabFold commit a95dcf30e8d801e477726fb997cbc55261731879
author | iuc |
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date | Sun, 24 Mar 2024 22:10:38 +0000 |
parents | |
children | 6fbd935575ce |
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-1:000000000000 | 0:941f89a0c552 |
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1 <macros> | |
2 <token name="@VERSION@">1.5.5</token> | |
3 <token name="@CUDA_VERSION@">12.2.2</token> | |
4 <token name="@VERSION_SUFFIX@">0</token> | |
5 <xml name="requirements"> | |
6 <requirements> | |
7 <container type="docker">ghcr.io/sokrypton/colabfold:@VERSION@-cuda@CUDA_VERSION@</container> | |
8 </requirements> | |
9 </xml> | |
10 <xml name="biotools"> | |
11 <xrefs> | |
12 <xref type="bio.tools">Colabfold</xref> | |
13 </xrefs> | |
14 </xml> | |
15 <xml name="citations"> | |
16 <citations> | |
17 <citation type="doi">10.1038/s41592-022-01488-1</citation> | |
18 </citations> | |
19 </xml> | |
20 <xml name="db_selector"> | |
21 <conditional name="select_db"> | |
22 <param name="use_db" type="select" label="Manually set database?"> | |
23 <option value="yes">Yes</option> | |
24 <option value="no">No</option> | |
25 </param> | |
26 <when value="no"></when> | |
27 <when value="yes"> | |
28 <param name="msa_mode" label="MSA mode" type="select"> | |
29 <option value="mmseqs2_uniref_env">mmseqs2_uniref_env</option> | |
30 <option value="mmseqs2_uniref">mmseqs2_uniref</option> | |
31 <option value="single_sequence">Use single sequence input</option> | |
32 <!-- <option value="custom">custom</option> --> | |
33 </param> | |
34 </when> | |
35 </conditional> | |
36 </xml> | |
37 </macros> |