Mercurial > repos > iuc > colabfold_msa
diff macros.xml @ 0:941f89a0c552 draft
planemo upload for repository https://github.com/sokrypton/ColabFold commit a95dcf30e8d801e477726fb997cbc55261731879
author | iuc |
---|---|
date | Sun, 24 Mar 2024 22:10:38 +0000 |
parents | |
children | 6fbd935575ce |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros.xml Sun Mar 24 22:10:38 2024 +0000 @@ -0,0 +1,37 @@ +<macros> + <token name="@VERSION@">1.5.5</token> + <token name="@CUDA_VERSION@">12.2.2</token> + <token name="@VERSION_SUFFIX@">0</token> + <xml name="requirements"> + <requirements> + <container type="docker">ghcr.io/sokrypton/colabfold:@VERSION@-cuda@CUDA_VERSION@</container> + </requirements> + </xml> + <xml name="biotools"> + <xrefs> + <xref type="bio.tools">Colabfold</xref> + </xrefs> + </xml> + <xml name="citations"> + <citations> + <citation type="doi">10.1038/s41592-022-01488-1</citation> + </citations> + </xml> + <xml name="db_selector"> + <conditional name="select_db"> + <param name="use_db" type="select" label="Manually set database?"> + <option value="yes">Yes</option> + <option value="no">No</option> + </param> + <when value="no"></when> + <when value="yes"> + <param name="msa_mode" label="MSA mode" type="select"> + <option value="mmseqs2_uniref_env">mmseqs2_uniref_env</option> + <option value="mmseqs2_uniref">mmseqs2_uniref</option> + <option value="single_sequence">Use single sequence input</option> + <!-- <option value="custom">custom</option> --> + </param> + </when> + </conditional> + </xml> +</macros> \ No newline at end of file