diff macros.xml @ 0:941f89a0c552 draft

planemo upload for repository https://github.com/sokrypton/ColabFold commit a95dcf30e8d801e477726fb997cbc55261731879
author iuc
date Sun, 24 Mar 2024 22:10:38 +0000
parents
children 6fbd935575ce
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+++ b/macros.xml	Sun Mar 24 22:10:38 2024 +0000
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+<macros>
+    <token name="@VERSION@">1.5.5</token>
+    <token name="@CUDA_VERSION@">12.2.2</token>
+    <token name="@VERSION_SUFFIX@">0</token>
+    <xml name="requirements">
+        <requirements>
+            <container type="docker">ghcr.io/sokrypton/colabfold:@VERSION@-cuda@CUDA_VERSION@</container>
+        </requirements>
+    </xml>
+    <xml name="biotools">
+        <xrefs>
+            <xref type="bio.tools">Colabfold</xref>
+        </xrefs>
+    </xml>
+    <xml name="citations">
+        <citations>
+            <citation type="doi">10.1038/s41592-022-01488-1</citation>
+        </citations>
+    </xml>
+    <xml name="db_selector">
+        <conditional name="select_db">
+            <param name="use_db" type="select" label="Manually set database?">
+                <option value="yes">Yes</option>
+                <option value="no">No</option>
+            </param>
+            <when value="no"></when>
+            <when value="yes">
+                <param name="msa_mode" label="MSA mode" type="select">
+                    <option value="mmseqs2_uniref_env">mmseqs2_uniref_env</option>
+                    <option value="mmseqs2_uniref">mmseqs2_uniref</option>
+                    <option value="single_sequence">Use single sequence input</option>
+                    <!-- <option value="custom">custom</option> -->
+                </param>
+            </when>
+        </conditional>
+    </xml>
+</macros>
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