Mercurial > repos > iuc > data_manager_build_staramr
diff test-data/staramr_database.loc.test @ 0:3658cf4b6fd2 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_staramr commit 45daaecba3332d984a900727bf348ffb07a07154
| author | iuc |
|---|---|
| date | Thu, 16 Jan 2025 08:28:55 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/staramr_database.loc.test Thu Jan 16 08:28:55 2025 +0000 @@ -0,0 +1,11 @@ +#This is a tab separated file describing the location of StarAMR databases +#used for the StarAMR tool +# +#file has this format (white space characters are TAB characters) +# +#The columns are: +#value name path resfinder_commit pointfinder_commit plasmidfinder_commit +# +#For example +#staramr_downloaded_20241004_resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502 ResFinder: tag 4.6.0, commit d1e607b, 2024-08-06 - PointFinder: tag 4.1.1, commit 694919f, 2024-08-08 - PlasmidFinder: commit 3e77502, 2024-03-07 (downloaded 20241004) /path/to/data d1e607b 694919f 3e77502 +staramr_downloaded_13012025_resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502 starAMR databases with ResFinder: 2.4.0_d1e607b_2024-08-06, PointFinder: 4.1.1_694919f_2024-08-08, PlasmidFinder: 3e77502_2024-03-07 /tmp/tmpc6qeamum/galaxy-dev/tool-data/staramr/resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502 d1e607b 694919f 3e77502 \ No newline at end of file