Mercurial > repos > iuc > data_manager_fetch_refseq
changeset 2:5d2ef93c6314 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
| author | iuc |
|---|---|
| date | Thu, 28 Nov 2019 15:47:16 -0500 |
| parents | 937f167631b1 |
| children | f1e545aa76c7 |
| files | data_manager/fetch_refseq.xml |
| diffstat | 1 files changed, 4 insertions(+), 6 deletions(-) [+] |
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--- a/data_manager/fetch_refseq.xml Sun Jan 13 09:26:57 2019 -0500 +++ b/data_manager/fetch_refseq.xml Thu Nov 28 15:47:16 2019 -0500 @@ -1,11 +1,11 @@ -<tool id="data_manager_fetch_refseq" name="RefSeq data manager" version="0.0.18" tool_type="manage_data"> +<tool id="data_manager_fetch_refseq" name="RefSeq data manager" version="0.0.19" tool_type="manage_data" profile="19.05"> <description>Fetch FASTA data from NCBI RefSeq and update all_fasta data table</description> <requirements> - <requirement type="package">python</requirement> - <requirement type="package">requests</requirement> + <requirement type="package" version="3.7">python</requirement> + <requirement type="package" version="2.22.0">requests</requirement> </requirements> <command detect_errors="exit_code"><![CDATA[ - python $__tool_directory__/fetch_refseq.py + python '$__tool_directory__/fetch_refseq.py' #if str( $advanced.advanced_selector ) == 'advanced': ${advanced.compress} #end if @@ -65,7 +65,6 @@ <assert_contents> <has_text text="2018-03-14"/> <has_text text="refseq_plastid"/> - <has_text text="/refseq_plastid."/> </assert_contents> </output> </test> @@ -79,7 +78,6 @@ <assert_contents> <has_text text="2018-03-14"/> <has_text text="refseq_plastid"/> - <has_text text="/refseq_plastid."/> </assert_contents> </output> </test>