Mercurial > repos > iuc > data_manager_gtdbtk_database_installer
changeset 10:3a3cb74b3f6e draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gtdbtk_database_installer commit c63b1bff90ebc5b5df0a4cbd9a294fc1d51583c7
| author | iuc |
|---|---|
| date | Thu, 09 Oct 2025 08:23:58 +0000 |
| parents | 3248e43703e7 |
| children | |
| files | data_manager/gtdbtk_database_installer.py data_manager/gtdbtk_database_installer.xml |
| diffstat | 2 files changed, 9 insertions(+), 2 deletions(-) [+] |
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--- a/data_manager/gtdbtk_database_installer.py Sun Oct 05 13:19:56 2025 +0000 +++ b/data_manager/gtdbtk_database_installer.py Thu Oct 09 08:23:58 2025 +0000 @@ -38,6 +38,9 @@ "meta_ar": "https://data.ace.uq.edu.au/public/gtdb/data/releases/release226/226.0/ar53_metadata_r226.tsv.gz", "meta_bac": "https://data.ace.uq.edu.au/public/gtdb/data/releases/release226/226.0/bac120_metadata_r226.tsv.gz", }, + "mocked": { + "full": "https://data.gtdb.ecogenomic.org/releases/latest/auxillary_files/gtdbtk_package/mockup_db/mockup.tar.gz", + }, } @@ -179,7 +182,10 @@ data_manager_entry["value"] = ( f"{database_name.replace(' ', '_').lower()}_release_{release}_downloaded_{time}" ) - data_manager_entry["name"] = f"{database_name} - release {release} ({time})" + if release == "mocked_226": + data_manager_entry["name"] = "Mocked GTBD DB (226)" + else: + data_manager_entry["name"] = f"{database_name} - release {release} ({time})" data_manager_entry["path"] = file_path data_manager_entry["version"] = release return data_manager_entry
--- a/data_manager/gtdbtk_database_installer.xml Sun Oct 05 13:19:56 2025 +0000 +++ b/data_manager/gtdbtk_database_installer.xml Thu Oct 09 08:23:58 2025 +0000 @@ -2,7 +2,7 @@ <description></description> <macros> <token name="@TOOL_VERSION@">226</token> - <token name="@VERSION_SUFFIX@">0</token> + <token name="@VERSION_SUFFIX@">1</token> <token name="@PROFILE@">20.09</token> </macros> <requirements> @@ -26,6 +26,7 @@ <option value="214">214</option> <option value="220">220</option> <option value="226">226</option> + <option value="mocked_226">mocked DB (226)</option> </param> </inputs> <outputs>