Mercurial > repos > iuc > data_manager_ncbi_fcs_gx_database_downloader
diff data_manager_conf.xml @ 1:35cef758050c draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_ncbi_fcs_gx_database_downloader commit 25c9d8d297d0e10f92e373f6a959274dedc10433
| author | iuc |
|---|---|
| date | Wed, 09 Oct 2024 08:53:07 +0000 |
| parents | 6be6e6198ac3 |
| children |
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--- a/data_manager_conf.xml Fri Jan 12 22:11:17 2024 +0000 +++ b/data_manager_conf.xml Wed Oct 09 08:53:07 2024 +0000 @@ -1,18 +1,22 @@ <data_managers> <data_manager tool_file="data_manager/data_manager_ncbi_fcs_gx_database_downloader.xml" id="data_manager_ncbi_fcs_gx_database_downloader"> - <data_table name="ncbi_fcs_gx_databases"> + <data_table name="ncbi_fcs_gx_databases_ext"> <output> <column name="value" /> + <column name="name" /> <column name="source_manifest" /> - <column name="name" output_ref="output_file"> + <column name="use_source_manifest" /> + <column name="phone_home" /> + <column name="phone_home_label" /> + <column name="local_manifest" output_ref="output_file"> <move type="directory"> - <source>${name}</source> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ncbi_fcs_gx_databases/${value}</target> + <source>${local_manifest}</source> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">ncbi_fcs_gx_databases_ext/${value}</target> </move> <value_translation><![CDATA[ #import os #set manifest_filename = os.path.basename($source_manifest) -$GALAXY_DATA_MANAGER_DATA_PATH/ncbi_fcs_gx_databases/$value/$manifest_filename +$GALAXY_DATA_MANAGER_DATA_PATH/ncbi_fcs_gx_databases_ext/$value/$manifest_filename ]]></value_translation> <value_translation type="function">abspath</value_translation> </column>