Mercurial > repos > iuc > data_manager_star_index_builder
diff data_manager_conf.xml @ 1:cdc4d8a998e1 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 0d434bca5083e908114d93e11094e48f49b98ed1
author | iuc |
---|---|
date | Fri, 21 Apr 2017 12:36:31 -0400 |
parents | e4b87a00b1df |
children | f537d3e00eb8 |
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--- a/data_manager_conf.xml Wed Nov 23 17:55:57 2016 -0500 +++ b/data_manager_conf.xml Fri Apr 21 12:36:31 2017 -0400 @@ -1,22 +1,24 @@ <?xml version="1.0"?> <data_managers> - - <data_manager tool_file="data_manager/rnastar_index_builder.xml" id="rnastar_index_builder" version="0.0.1"> - <data_table name="rnastar_index"> + <data_manager tool_file="data_manager/rna_star_index_builder.xml" id="rna_star_index_builder" version="0.0.3"> + <data_table name="rnastar_index2"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="out_file" > <move type="directory" relativize_symlinks="True"> - <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/rnastar_index/${value}</target> + <!-- <source>${path}</source> + out_file.extra_files_path is used as base by default + if no source, eg for type=directory, then refers to base + --> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/rnastar_index2/${value}</target> </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/rnastar_index/${value}/${path}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/rnastar_index2/${value}/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> + <column name="withGTF" /> </output> </data_table> </data_manager> - </data_managers>