changeset 2:562f3c677828 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit e0cd7ae10ce97bed51594e7cc0b969a803d698b7

--- a/datamash-ops.xml	Wed Sep 21 21:44:29 2016 -0400
+++ b/datamash-ops.xml	Fri Sep 07 10:58:27 2018 -0400
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="datamash_ops" name="Datamash" version="1.0.6">
+<tool id="datamash_ops" name="Datamash" version="@WRAPPER_VERSION@">
     <description>(operations on tabular data)</description>
     <macros>
         <import>macros.xml</import>
@@ -21,7 +21,7 @@
                     ${oper.op_name}
                     ${oper.op_column}
                 #end for
-                < $in_file > $out_file
+                < $in_file > '$out_file'
           ]]>
     </command>
     <expand macro="inputs_outputs">
@@ -56,9 +56,10 @@
                 <option value="skurt">Kurtosis (sample)</option>
                 <option value="pkurt">Kurtosis (population)</option>
                 <option value="jarque">Jarque-Bera Normality test</option>
-                <option value="dpo">DAgostino-Pearson Omnibus Normality Test</option>
+                <option value="dpo">D Agostino-Pearson Omnibus Normality Test</option>
                 <option value="mode">Mode</option>
                 <option value="antimode">Anti-Mode</option>
+                <option value="rand">One random value from the group</option>
                 <option value="unique">Combine all unique values</option>
                 <option value="collapse">Combine all values</option>
                 <option value="countunique">Count Unique values</option>
@@ -79,7 +80,7 @@
                 <param name="op_name" value="sum" />
                 <param name="op_column" value="3" />
             </repeat>
-            <output file="group_compute_output.txt" name="out_file" ftpye="tabular" />
+            <output file="group_compute_output.txt" name="out_file" ftype="tabular" />
         </test>
     </tests>
     <help>

--- a/macros.xml	Wed Sep 21 21:44:29 2016 -0400
+++ b/macros.xml	Fri Sep 07 10:58:27 2018 -0400
@@ -1,5 +1,6 @@
 <?xml version="1.0"?>
 <macros>
+    <token name="@WRAPPER_VERSION@">1.1.0</token>
     <xml name="inputs_outputs">
         <inputs>
             <param format="tabular" help="" label="Input tabular dataset" name="in_file" type="data" />
@@ -12,7 +13,7 @@
 
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="1.0.6">datamash</requirement>
+            <requirement type="package" version="@WRAPPER_VERSION@">datamash</requirement>
         </requirements>
     </xml>
     <xml name="stdio">

--- a/tool_dependencies.xml	Wed Sep 21 21:44:29 2016 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,6 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-    <package name="datamash" version="1.0.6">
-        <repository changeset_revision="414953c0168d" name="package_datamash_1_0_6" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-    </package>
-</tool_dependency>