view test-data/annotated1_genes_faa.fasta @ 3:f081f73cc0be draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dram commit 3234c3d93fa294fa9c2c5148eae4b399d42904d8
author iuc
date Fri, 23 Aug 2024 08:18:27 +0000
parents 5b577e90f822
children
line wrap: on
line source

>dataset_5327_scaffold_1510_1 rank: D; Sigma-54 interaction domain [PF00158.29]; Sigma-54 interaction domain [PF14532.9]; PAS fold [PF08448.13]; PAS domain [PF13426.10]; PAS fold [PF00989.28] (db=pfam)
MGQDRQNSQELLNELNYLRQRLAELEEMNRDYLGMIENSYDAMSIADCDGRLLLINPAFERIMGITKSETLSRTIQDLTNDGITDASAALKAFETGKQESVIINTRAGRQVLSTGVPFYDQTGKIVRVYCNIRDVTELNHLRQKFEQSQKLASRYLFELLEFKRGKTFKFVAHSNKIKQMLETVHRIAVVDSTVLILGESGVGKDLVARIIHEASSRNDSGSFLKINCAAIPAELLESELFGYEGGAFTGAKKDGKAGYFEIADKGTLFLDEIGELPQKLQVKLLAVIQDQKITRIGGVKEKDVDVRIIAATNRDLEEMVKQGNFREDLFYRLNVIPITIPPLRERKEDIPFLIVHYTELFNKKYNRAVKFSKEAIEMLCKYNWPGNVRELANLVERVIVIGQESILNPEHIPGKYHTAAQNMAETVSDFKSLSDAVEKYELKLVKNTLELCKTREEAASKLGISLSGLSRRIRRLKQLENEGFI*
>dataset_5327_scaffold_1510_2 rank: D; AMP-binding enzyme [PF00501.31]; AMP-binding enzyme C-terminal domain [PF13193.9] (db=pfam)
MTVSKWMHVGVALKMNARNYPDKLGCQDKRKSYTFKEWNERSCRLASALKDMGVGYGERVAVIAYNRVEWMEIYAACAKGGQIVVPVMFRLTPHEFEYIVNHSGCKAFIVEEPFVKGVDSVRDILTTIPEGNYIYLGDGEAPEGYIHYESVMAQGDPSEPDISVDAADPWTIMYTSGTTGRPKGVVRTHENYLGQYLINNINMGVRPNDKPLLVMPMCHVNSIYYSFCYTYISAPVMVYNMVSFDPEDLLKTIVDYRVTFTSLVPTHYIMILALPDEIKQKYDTSCIRQLLISSAPARRDLKLAIMKYFKSAELWEAYGSTETSLVTYLRPEDQLTKLGSIGKEVFGCDEIKLLDENGEEVPVGEVGELYSRSPGMFKEYWKDPGKTSEVFRGKWCTAGDMGRRDEDGYYYLVDRKANMIISGGENVYPSEVENVVGAHPAVKDGAVIGVPDQKWGEIVLAFIILHEGYQAGDELAGEIINFCKDRVAGYKRPKSIRFISEEEMPRTGNGKIMHRVLREKYGKWSDSV*
>dataset_5327_scaffold_1510_3 rank: D; 2-hydroxyglutaryl-CoA dehydratase, D-component [PF06050.16] (db=pfam)
MTDRKTIKEICAQFKEIIAEPGLKIQRLQAEKPAPVIGFLPTDVPEELIHASGAYPFGLVAYDGLWVNRADAHLQTWACSLARCSFGMSLAGKFDYLNGLIIPHICDTTRMISDIWKQNRPYDFMENFILPRQVDRPSARSYLTGELGRLKARLEQFTGRSINGEKLNRSINLYNKHRALLRKLYQLHGHHPDLITNLDLFNAIKSSMLIPKGLHNTMVSELISAVEQQAREKQAEDNHGRVRVVVTGKVWEPPDIMEILDQSKVVCVADDLCTGYRYIANDAAEDGDPLETLAVRQINRPPSPCFVNREQDRLEYLTRKVNECGAKGVIFLHLKFCETENYDYPLLRDALSAANIPSVRVETEIGNMSQGQISTRIQAFAEMLGGGDIYGS*