Mercurial > repos > iuc > ena_upload

diff ena_upload.xml @ 13:ea5e944f447d draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ena_upload commit d87ac7944bca149b5ae3fc33d445b6c25051ab26
author iuc
date Wed, 27 Mar 2024 16:46:55 +0000
parents f803a68fc9e5
children
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--- a/ena_upload.xml	Wed Mar 27 11:54:25 2024 +0000
+++ b/ena_upload.xml	Wed Mar 27 16:46:55 2024 +0000
@@ -2,7 +2,7 @@
     <description>Submission of (meta)data to the European Nucleotide Archive (ENA)</description>
     <macros>
         <token name="@TOOL_VERSION@">0.7.1</token>
-        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@VERSION_SUFFIX@">1</token>
         <import>samples_macros.xml</import>
     </macros>
     <requirements>
@@ -196,7 +196,7 @@
     --sample '$samples_table_path'
 #elif $action_options.input_format_conditional.input_format == "isa_json":
     --isa_json ./isa_json_input.json
-    --isa_assay_stream '$isa_assay_stream'
+    --isa_assay_stream '$action_options.input_format_conditional.isa_assay_stream'
 #end if
 #if $action_options.input_format_conditional.input_format == "build_tables":
     #if $action_options.input_format_conditional.conditional_viral_metadata.viral_sample == "True":