Mercurial > repos > iuc > episcanpy_preprocess

annotate test-data/chrY.gtf @ 0:8ba672d0d8aa draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
author iuc
date Tue, 18 Apr 2023 13:18:50 +0000
parents
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8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
1 chrY HAVANA gene 276322 303356 . + . gene_id "ENSG00000182378.15_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; level 2; hgnc_id "HGNC:23148"; tag "PAR"; havana_gene "OTTHUMG00000022693.6";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
2 chrY HAVANA transcript 276322 303353 . + . gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
3 chrY HAVANA exon 276322 276394 . + . gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; exon_number 1; exon_id "ENSE00001489430.1"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
4 chrY HAVANA exon 281482 281684 . + . gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; exon_number 2; exon_id "ENSE00001306908.2"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
5 chrY HAVANA exon 284167 284314 . + . gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; exon_number 3; exon_id "ENSE00003812308.1"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
6 chrY HAVANA CDS 284188 284314 . + 0 gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; exon_number 3; exon_id "ENSE00003812308.1"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
7 chrY HAVANA start_codon 284188 284190 . + 0 gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; exon_number 3; exon_id "ENSE00003812308.1"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
8 chrY HAVANA exon 288733 288869 . + . gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; exon_number 4; exon_id "ENSE00003812426.1"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
9 chrY HAVANA CDS 288733 288869 . + 2 gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; exon_number 4; exon_id "ENSE00003812426.1"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
10 chrY HAVANA exon 290648 290776 . + . gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; exon_number 5; exon_id "ENSE00003812724.1"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
11 chrY HAVANA CDS 290648 290776 . + 0 gene_id "ENSG00000182378.15_PAR_Y"; transcript_id "ENST00000399012.6_PAR_Y"; gene_type "protein_coding"; gene_name "PLCXD1"; transcript_type "protein_coding"; transcript_name "PLCXD1-202"; exon_number 5; exon_id "ENSE00003812724.1"; level 2; protein_id "ENSP00000381976.1"; transcript_support_level "5"; hgnc_id "HGNC:23148"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14103.1"; havana_gene "OTTHUMG00000022693.6"; havana_transcript "OTTHUMT00000058878.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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12
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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13 chrY ENSEMBL gene 1300256 1300375 . - . gene_id "ENSG00000223274.6_PAR_Y"; gene_type "rRNA_pseudogene"; gene_name "RNA5SP498"; level 3; hgnc_id "HGNC:43398"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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14 chrY ENSEMBL transcript 1300256 1300375 . - . gene_id "ENSG00000223274.6_PAR_Y"; transcript_id "ENST00000411342.6_PAR_Y"; gene_type "rRNA_pseudogene"; gene_name "RNA5SP498"; transcript_type "rRNA_pseudogene"; transcript_name "RNA5SP498-201"; level 3; transcript_support_level "NA"; hgnc_id "HGNC:43398"; tag "basic"; tag "Ensembl_canonical"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
15 chrY ENSEMBL exon 1300256 1300375 . - . gene_id "ENSG00000223274.6_PAR_Y"; transcript_id "ENST00000411342.6_PAR_Y"; gene_type "rRNA_pseudogene"; gene_name "RNA5SP498"; transcript_type "rRNA_pseudogene"; transcript_name "RNA5SP498-201"; exon_number 1; exon_id "ENSE00001591160.1"; level 3; transcript_support_level "NA"; hgnc_id "HGNC:43398"; tag "basic"; tag "Ensembl_canonical"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
16 chrY HAVANA gene 1336616 1382689 . + . gene_id "ENSG00000185291.12_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; level 2; hgnc_id "HGNC:6012"; tag "PAR"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
17 chrY ENSEMBL transcript 1336616 1382689 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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18 chrY ENSEMBL exon 1336616 1336926 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 1; exon_id "ENSE00001345875.2"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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19 chrY ENSEMBL exon 1341728 1341829 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 2; exon_id "ENSE00001338052.3"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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20 chrY ENSEMBL CDS 1341766 1341829 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 2; exon_id "ENSE00001338052.3"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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21 chrY ENSEMBL start_codon 1341766 1341768 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 2; exon_id "ENSE00001338052.3"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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22 chrY ENSEMBL exon 1352100 1352232 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 3; exon_id "ENSE00001318197.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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23 chrY ENSEMBL CDS 1352100 1352232 . + 2 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 3; exon_id "ENSE00001318197.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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24 chrY ENSEMBL exon 1352322 1352506 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 4; exon_id "ENSE00001293249.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
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25 chrY ENSEMBL CDS 1352322 1352506 . + 1 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 4; exon_id "ENSE00001293249.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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26 chrY ENSEMBL exon 1356221 1356336 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 5; exon_id "ENSE00002271427.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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27 chrY ENSEMBL CDS 1356221 1356336 . + 2 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 5; exon_id "ENSE00002271427.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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28 chrY ENSEMBL exon 1358861 1358887 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 6; exon_id "ENSE00001728827.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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29 chrY ENSEMBL CDS 1358861 1358887 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 6; exon_id "ENSE00001728827.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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30 chrY ENSEMBL exon 1365138 1365252 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 7; exon_id "ENSE00001659999.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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31 chrY ENSEMBL CDS 1365138 1365252 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 7; exon_id "ENSE00001659999.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
32 chrY ENSEMBL exon 1378659 1378764 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 8; exon_id "ENSE00001593189.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
33 chrY ENSEMBL CDS 1378659 1378764 . + 2 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 8; exon_id "ENSE00001593189.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
34 chrY ENSEMBL exon 1381023 1381104 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 9; exon_id "ENSE00001625087.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
35 chrY ENSEMBL CDS 1381023 1381104 . + 1 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 9; exon_id "ENSE00001625087.1"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
36 chrY ENSEMBL exon 1382391 1382689 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 10; exon_id "ENSE00001673760.3"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
37 chrY ENSEMBL CDS 1382391 1382462 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 10; exon_id "ENSE00001673760.3"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
38 chrY ENSEMBL stop_codon 1382463 1382465 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 10; exon_id "ENSE00001673760.3"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
39 chrY ENSEMBL UTR 1336616 1336926 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 1; exon_id "ENSE00001345875.2"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
40 chrY ENSEMBL UTR 1341728 1341765 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 2; exon_id "ENSE00001338052.3"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
41 chrY ENSEMBL UTR 1382463 1382689 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000381469.7_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-202"; exon_number 10; exon_id "ENSE00001673760.3"; level 3; protein_id "ENSP00000370878.2"; transcript_support_level "5"; hgnc_id "HGNC:6012"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS59158.1"; havana_gene "OTTHUMG00000021059.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
42 chrY HAVANA transcript 1336785 1382689 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
43 chrY HAVANA exon 1336785 1336926 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 1; exon_id "ENSE00003893564.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
44 chrY HAVANA exon 1341728 1341829 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 2; exon_id "ENSE00001338052.3"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
45 chrY HAVANA CDS 1341766 1341829 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 2; exon_id "ENSE00001338052.3"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
46 chrY HAVANA start_codon 1341766 1341768 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 2; exon_id "ENSE00001338052.3"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
47 chrY HAVANA exon 1345316 1345434 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 3; exon_id "ENSE00001330589.2"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
48 chrY HAVANA CDS 1345316 1345434 . + 2 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 3; exon_id "ENSE00001330589.2"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
49 chrY HAVANA exon 1348431 1348545 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 4; exon_id "ENSE00001289795.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
50 chrY HAVANA CDS 1348431 1348545 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 4; exon_id "ENSE00001289795.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
51 chrY HAVANA exon 1352100 1352232 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 5; exon_id "ENSE00001318197.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
52 chrY HAVANA CDS 1352100 1352232 . + 2 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 5; exon_id "ENSE00001318197.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
53 chrY HAVANA exon 1352322 1352506 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 6; exon_id "ENSE00001293249.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
54 chrY HAVANA CDS 1352322 1352506 . + 1 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 6; exon_id "ENSE00001293249.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
55 chrY HAVANA exon 1356221 1356336 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 7; exon_id "ENSE00002271427.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
56 chrY HAVANA CDS 1356221 1356336 . + 2 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 7; exon_id "ENSE00002271427.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
57 chrY HAVANA exon 1358861 1358887 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 8; exon_id "ENSE00001728827.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
58 chrY HAVANA CDS 1358861 1358887 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 8; exon_id "ENSE00001728827.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
59 chrY HAVANA exon 1365138 1365252 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 9; exon_id "ENSE00001659999.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
60 chrY HAVANA CDS 1365138 1365252 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 9; exon_id "ENSE00001659999.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
61 chrY HAVANA exon 1378659 1378764 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 10; exon_id "ENSE00001593189.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
62 chrY HAVANA CDS 1378659 1378764 . + 2 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 10; exon_id "ENSE00001593189.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
63 chrY HAVANA exon 1381023 1381104 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 11; exon_id "ENSE00001625087.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
64 chrY HAVANA CDS 1381023 1381104 . + 1 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 11; exon_id "ENSE00001625087.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
65 chrY HAVANA exon 1382391 1382689 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 12; exon_id "ENSE00001673760.3"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
66 chrY HAVANA CDS 1382391 1382462 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 12; exon_id "ENSE00001673760.3"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
67 chrY HAVANA stop_codon 1382463 1382465 . + 0 gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 12; exon_id "ENSE00001673760.3"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
68 chrY HAVANA UTR 1336785 1336926 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 1; exon_id "ENSE00003893564.1"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
69 chrY HAVANA UTR 1341728 1341765 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 2; exon_id "ENSE00001338052.3"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
70 chrY HAVANA UTR 1382463 1382689 . + . gene_id "ENSG00000185291.12_PAR_Y"; transcript_id "ENST00000331035.10_PAR_Y"; gene_type "protein_coding"; gene_name "IL3RA"; transcript_type "protein_coding"; transcript_name "IL3RA-201"; exon_number 12; exon_id "ENSE00001673760.3"; level 2; protein_id "ENSP00000327890.4"; transcript_support_level "1"; hgnc_id "HGNC:6012"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14113.1"; havana_gene "OTTHUMG00000021059.5"; havana_transcript "OTTHUMT00000055600.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
71 chrY HAVANA gene 1386152 1392113 . - . gene_id "ENSG00000169100.14_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; level 2; hgnc_id "HGNC:10992"; tag "PAR"; havana_gene "OTTHUMG00000021058.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
72 chrY HAVANA transcript 1386152 1392113 . - . gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
73 chrY HAVANA exon 1391899 1392113 . - . gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 1; exon_id "ENSE00001913454.2"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
74 chrY HAVANA CDS 1391899 1392009 . - 0 gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 1; exon_id "ENSE00001913454.2"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
75 chrY HAVANA start_codon 1392007 1392009 . - 0 gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 1; exon_id "ENSE00001913454.2"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
76 chrY HAVANA exon 1389241 1389727 . - . gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 2; exon_id "ENSE00003590251.1"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
77 chrY HAVANA CDS 1389241 1389727 . - 0 gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 2; exon_id "ENSE00003590251.1"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
78 chrY HAVANA exon 1387279 1387419 . - . gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 3; exon_id "ENSE00001801425.1"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
79 chrY HAVANA CDS 1387279 1387419 . - 2 gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 3; exon_id "ENSE00001801425.1"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
80 chrY HAVANA exon 1386152 1386759 . - . gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 4; exon_id "ENSE00001153206.4"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
81 chrY HAVANA CDS 1386605 1386759 . - 2 gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 4; exon_id "ENSE00001153206.4"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
82 chrY HAVANA stop_codon 1386602 1386604 . - 0 gene_id "ENSG00000169100.14_PAR_Y"; transcript_id "ENST00000381401.11_PAR_Y"; gene_type "protein_coding"; gene_name "SLC25A6"; transcript_type "protein_coding"; transcript_name "SLC25A6-201"; exon_number 4; exon_id "ENSE00001153206.4"; level 2; protein_id "ENSP00000370808.5"; transcript_support_level "1"; hgnc_id "HGNC:10992"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14114.1"; havana_gene "OTTHUMG00000021058.2"; havana_transcript "OTTHUMT00000055596.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
83 chrY HAVANA exon 1452748 1452909 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 1; exon_id "ENSE00002313299.2"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
84 chrY HAVANA CDS 1452748 1452840 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 1; exon_id "ENSE00002313299.2"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
85 chrY HAVANA start_codon 1452838 1452840 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 1; exon_id "ENSE00002313299.2"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
86 chrY HAVANA exon 1442186 1442317 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 2; exon_id "ENSE00003580452.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
87 chrY HAVANA CDS 1442186 1442317 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 2; exon_id "ENSE00003580452.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
88 chrY HAVANA exon 1439097 1439144 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 3; exon_id "ENSE00003664640.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
89 chrY HAVANA CDS 1439097 1439144 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 3; exon_id "ENSE00003664640.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
90 chrY HAVANA exon 1435694 1435758 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 4; exon_id "ENSE00001122412.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
91 chrY HAVANA CDS 1435694 1435758 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 4; exon_id "ENSE00001122412.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
92 chrY HAVANA exon 1435022 1435083 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 5; exon_id "ENSE00003500487.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
93 chrY HAVANA CDS 1435022 1435083 . - 1 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 5; exon_id "ENSE00003500487.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
94 chrY HAVANA exon 1432269 1432377 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 6; exon_id "ENSE00003486552.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
95 chrY HAVANA CDS 1432269 1432377 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 6; exon_id "ENSE00003486552.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
96 chrY HAVANA exon 1427734 1428121 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 7; exon_id "ENSE00001122391.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
97 chrY HAVANA CDS 1427734 1428121 . - 1 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 7; exon_id "ENSE00001122391.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
98 chrY HAVANA exon 1425525 1425687 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 8; exon_id "ENSE00001122384.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
99 chrY HAVANA CDS 1425525 1425687 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 8; exon_id "ENSE00001122384.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
100 chrY HAVANA exon 1421658 1421842 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 9; exon_id "ENSE00001122378.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
101 chrY HAVANA CDS 1421658 1421842 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 9; exon_id "ENSE00001122378.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
102 chrY HAVANA exon 1418982 1419114 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 10; exon_id "ENSE00001122372.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
103 chrY HAVANA CDS 1418982 1419114 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 10; exon_id "ENSE00001122372.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
104 chrY HAVANA exon 1417973 1418116 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 11; exon_id "ENSE00001122363.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
105 chrY HAVANA CDS 1417973 1418116 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 11; exon_id "ENSE00001122363.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
106 chrY HAVANA exon 1412732 1412854 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 12; exon_id "ENSE00001122361.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
107 chrY HAVANA CDS 1412732 1412854 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 12; exon_id "ENSE00001122361.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
108 chrY HAVANA exon 1403139 1403489 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 13; exon_id "ENSE00002288630.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
109 chrY HAVANA CDS 1403272 1403489 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 13; exon_id "ENSE00002288630.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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diff changeset
110 chrY HAVANA stop_codon 1403269 1403271 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 13; exon_id "ENSE00002288630.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
111 chrY HAVANA UTR 1452841 1452909 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 1; exon_id "ENSE00002313299.2"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
112 chrY HAVANA UTR 1403139 1403271 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381317.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-201"; exon_number 13; exon_id "ENSE00002288630.1"; level 2; protein_id "ENSP00000370718.3"; transcript_support_level "1"; hgnc_id "HGNC:751"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS43917.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055595.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
113 chrY ENSEMBL transcript 1403139 1453762 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
114 chrY ENSEMBL exon 1453618 1453762 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 1; exon_id "ENSE00002227900.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
115 chrY ENSEMBL exon 1442186 1442317 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 2; exon_id "ENSE00003522171.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
116 chrY ENSEMBL CDS 1442186 1442236 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 2; exon_id "ENSE00003522171.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
117 chrY ENSEMBL start_codon 1442234 1442236 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 2; exon_id "ENSE00003522171.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
118 chrY ENSEMBL exon 1439097 1439144 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 3; exon_id "ENSE00003664640.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
119 chrY ENSEMBL CDS 1439097 1439144 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 3; exon_id "ENSE00003664640.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
120 chrY ENSEMBL exon 1435694 1435758 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 4; exon_id "ENSE00001122412.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
121 chrY ENSEMBL CDS 1435694 1435758 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 4; exon_id "ENSE00001122412.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
122 chrY ENSEMBL exon 1435022 1435083 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 5; exon_id "ENSE00003500487.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
123 chrY ENSEMBL CDS 1435022 1435083 . - 1 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 5; exon_id "ENSE00003500487.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
124 chrY ENSEMBL exon 1432269 1432377 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 6; exon_id "ENSE00003486552.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
125 chrY ENSEMBL CDS 1432269 1432377 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 6; exon_id "ENSE00003486552.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
126 chrY ENSEMBL exon 1427734 1428121 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 7; exon_id "ENSE00001122391.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
127 chrY ENSEMBL CDS 1427734 1428121 . - 1 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 7; exon_id "ENSE00001122391.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
128 chrY ENSEMBL exon 1425525 1425687 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 8; exon_id "ENSE00001122384.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
129 chrY ENSEMBL CDS 1425525 1425687 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 8; exon_id "ENSE00001122384.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
130 chrY ENSEMBL exon 1421658 1421842 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 9; exon_id "ENSE00001122378.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
131 chrY ENSEMBL CDS 1421658 1421842 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 9; exon_id "ENSE00001122378.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
132 chrY ENSEMBL exon 1418982 1419114 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 10; exon_id "ENSE00001122372.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
133 chrY ENSEMBL CDS 1418982 1419114 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 10; exon_id "ENSE00001122372.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
134 chrY ENSEMBL exon 1417973 1418116 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 11; exon_id "ENSE00001122363.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
135 chrY ENSEMBL CDS 1417973 1418116 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 11; exon_id "ENSE00001122363.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
136 chrY ENSEMBL exon 1412732 1412854 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 12; exon_id "ENSE00001122361.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
137 chrY ENSEMBL CDS 1412732 1412854 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 12; exon_id "ENSE00001122361.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
138 chrY ENSEMBL exon 1403139 1403489 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 13; exon_id "ENSE00002288630.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
139 chrY ENSEMBL CDS 1403272 1403489 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 13; exon_id "ENSE00002288630.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
140 chrY ENSEMBL stop_codon 1403269 1403271 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 13; exon_id "ENSE00002288630.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
141 chrY ENSEMBL UTR 1453618 1453762 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 1; exon_id "ENSE00002227900.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
142 chrY ENSEMBL UTR 1442237 1442317 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 2; exon_id "ENSE00003522171.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
143 chrY ENSEMBL UTR 1403139 1403271 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000534940.6_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-206"; exon_number 13; exon_id "ENSE00002288630.1"; level 3; protein_id "ENSP00000446410.1"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55362.1"; havana_gene "OTTHUMG00000021057.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
144 chrY HAVANA transcript 1403141 1452929 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
145 chrY HAVANA exon 1452748 1452929 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 1; exon_id "ENSE00001488222.3"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
146 chrY HAVANA CDS 1452748 1452840 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 1; exon_id "ENSE00001488222.3"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
147 chrY HAVANA start_codon 1452838 1452840 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 1; exon_id "ENSE00001488222.3"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
148 chrY HAVANA exon 1442186 1442317 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 2; exon_id "ENSE00003580452.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
149 chrY HAVANA CDS 1442186 1442317 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 2; exon_id "ENSE00003580452.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
150 chrY HAVANA exon 1435694 1435758 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 3; exon_id "ENSE00001122412.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
151 chrY HAVANA CDS 1435694 1435758 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 3; exon_id "ENSE00001122412.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
152 chrY HAVANA exon 1435022 1435083 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 4; exon_id "ENSE00003500487.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
153 chrY HAVANA CDS 1435022 1435083 . - 1 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 4; exon_id "ENSE00003500487.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
154 chrY HAVANA exon 1432269 1432377 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 5; exon_id "ENSE00003486552.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
155 chrY HAVANA CDS 1432269 1432377 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 5; exon_id "ENSE00003486552.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
156 chrY HAVANA exon 1427734 1428121 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 6; exon_id "ENSE00001122391.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
157 chrY HAVANA CDS 1427734 1428121 . - 1 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 6; exon_id "ENSE00001122391.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
158 chrY HAVANA exon 1425525 1425687 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 7; exon_id "ENSE00001122384.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
159 chrY HAVANA CDS 1425525 1425687 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 7; exon_id "ENSE00001122384.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
160 chrY HAVANA exon 1421658 1421842 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 8; exon_id "ENSE00001122378.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
161 chrY HAVANA CDS 1421658 1421842 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 8; exon_id "ENSE00001122378.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
162 chrY HAVANA exon 1418982 1419114 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 9; exon_id "ENSE00001122372.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
163 chrY HAVANA CDS 1418982 1419114 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 9; exon_id "ENSE00001122372.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
164 chrY HAVANA exon 1417973 1418116 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 10; exon_id "ENSE00001122363.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
165 chrY HAVANA CDS 1417973 1418116 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 10; exon_id "ENSE00001122363.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
166 chrY HAVANA exon 1412732 1412854 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 11; exon_id "ENSE00001122361.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
167 chrY HAVANA CDS 1412732 1412854 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 11; exon_id "ENSE00001122361.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
168 chrY HAVANA exon 1403141 1403489 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 12; exon_id "ENSE00001555512.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
169 chrY HAVANA CDS 1403272 1403489 . - 2 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 12; exon_id "ENSE00001555512.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
170 chrY HAVANA stop_codon 1403269 1403271 . - 0 gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 12; exon_id "ENSE00001555512.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
171 chrY HAVANA UTR 1452841 1452929 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 1; exon_id "ENSE00001488222.3"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
172 chrY HAVANA UTR 1403141 1403271 . - . gene_id "ENSG00000169093.16_PAR_Y"; transcript_id "ENST00000381333.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMTL"; transcript_type "protein_coding"; transcript_name "ASMTL-202"; exon_number 12; exon_id "ENSE00001555512.1"; level 2; protein_id "ENSP00000370734.4"; transcript_support_level "2"; hgnc_id "HGNC:751"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55363.1"; havana_gene "OTTHUMG00000021057.2"; havana_transcript "OTTHUMT00000055591.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
173 chrY HAVANA gene 1462581 1537185 . - . gene_id "ENSG00000182162.11_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; level 2; hgnc_id "HGNC:15524"; tag "retrogene"; tag "PAR"; havana_gene "OTTHUMG00000021060.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
174 chrY HAVANA transcript 1462581 1537185 . - . gene_id "ENSG00000182162.11_PAR_Y"; transcript_id "ENST00000381297.10_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; transcript_type "protein_coding"; transcript_name "P2RY8-201"; level 2; protein_id "ENSP00000370697.4"; transcript_support_level "1"; hgnc_id "HGNC:15524"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14115.1"; havana_gene "OTTHUMG00000021060.3"; havana_transcript "OTTHUMT00000055602.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
175 chrY HAVANA exon 1536921 1537185 . - . gene_id "ENSG00000182162.11_PAR_Y"; transcript_id "ENST00000381297.10_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; transcript_type "protein_coding"; transcript_name "P2RY8-201"; exon_number 1; exon_id "ENSE00001337924.4"; level 2; protein_id "ENSP00000370697.4"; transcript_support_level "1"; hgnc_id "HGNC:15524"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14115.1"; havana_gene "OTTHUMG00000021060.3"; havana_transcript "OTTHUMT00000055602.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
176 chrY HAVANA exon 1462581 1466582 . - . gene_id "ENSG00000182162.11_PAR_Y"; transcript_id "ENST00000381297.10_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; transcript_type "protein_coding"; transcript_name "P2RY8-201"; exon_number 2; exon_id "ENSE00001488116.4"; level 2; protein_id "ENSP00000370697.4"; transcript_support_level "1"; hgnc_id "HGNC:15524"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14115.1"; havana_gene "OTTHUMG00000021060.3"; havana_transcript "OTTHUMT00000055602.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
177 chrY HAVANA CDS 1465482 1466558 . - 0 gene_id "ENSG00000182162.11_PAR_Y"; transcript_id "ENST00000381297.10_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; transcript_type "protein_coding"; transcript_name "P2RY8-201"; exon_number 2; exon_id "ENSE00001488116.4"; level 2; protein_id "ENSP00000370697.4"; transcript_support_level "1"; hgnc_id "HGNC:15524"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14115.1"; havana_gene "OTTHUMG00000021060.3"; havana_transcript "OTTHUMT00000055602.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
178 chrY HAVANA start_codon 1466556 1466558 . - 0 gene_id "ENSG00000182162.11_PAR_Y"; transcript_id "ENST00000381297.10_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; transcript_type "protein_coding"; transcript_name "P2RY8-201"; exon_number 2; exon_id "ENSE00001488116.4"; level 2; protein_id "ENSP00000370697.4"; transcript_support_level "1"; hgnc_id "HGNC:15524"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14115.1"; havana_gene "OTTHUMG00000021060.3"; havana_transcript "OTTHUMT00000055602.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
179 chrY HAVANA stop_codon 1465479 1465481 . - 0 gene_id "ENSG00000182162.11_PAR_Y"; transcript_id "ENST00000381297.10_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; transcript_type "protein_coding"; transcript_name "P2RY8-201"; exon_number 2; exon_id "ENSE00001488116.4"; level 2; protein_id "ENSP00000370697.4"; transcript_support_level "1"; hgnc_id "HGNC:15524"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14115.1"; havana_gene "OTTHUMG00000021060.3"; havana_transcript "OTTHUMT00000055602.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
180 chrY HAVANA UTR 1536921 1537185 . - . gene_id "ENSG00000182162.11_PAR_Y"; transcript_id "ENST00000381297.10_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; transcript_type "protein_coding"; transcript_name "P2RY8-201"; exon_number 1; exon_id "ENSE00001337924.4"; level 2; protein_id "ENSP00000370697.4"; transcript_support_level "1"; hgnc_id "HGNC:15524"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14115.1"; havana_gene "OTTHUMG00000021060.3"; havana_transcript "OTTHUMT00000055602.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
181 chrY HAVANA UTR 1462581 1465481 . - . gene_id "ENSG00000182162.11_PAR_Y"; transcript_id "ENST00000381297.10_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; transcript_type "protein_coding"; transcript_name "P2RY8-201"; exon_number 2; exon_id "ENSE00001488116.4"; level 2; protein_id "ENSP00000370697.4"; transcript_support_level "1"; hgnc_id "HGNC:15524"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14115.1"; havana_gene "OTTHUMG00000021060.3"; havana_transcript "OTTHUMT00000055602.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
182 chrY HAVANA UTR 1466559 1466582 . - . gene_id "ENSG00000182162.11_PAR_Y"; transcript_id "ENST00000381297.10_PAR_Y"; gene_type "protein_coding"; gene_name "P2RY8"; transcript_type "protein_coding"; transcript_name "P2RY8-201"; exon_number 2; exon_id "ENSE00001488116.4"; level 2; protein_id "ENSP00000370697.4"; transcript_support_level "1"; hgnc_id "HGNC:15524"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14115.1"; havana_gene "OTTHUMG00000021060.3"; havana_transcript "OTTHUMT00000055602.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
183 chrY HAVANA gene 1591604 1602520 . + . gene_id "ENSG00000197976.12_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; level 2; hgnc_id "HGNC:18783"; tag "PAR"; havana_gene "OTTHUMG00000021063.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
184 chrY HAVANA transcript 1591604 1602520 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
185 chrY HAVANA exon 1591604 1591769 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 1; exon_id "ENSE00001297134.5"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
186 chrY HAVANA exon 1593444 1594224 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 2; exon_id "ENSE00002180175.1"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
187 chrY HAVANA CDS 1593463 1594224 . + 0 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 2; exon_id "ENSE00002180175.1"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
188 chrY HAVANA start_codon 1593463 1593465 . + 0 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 2; exon_id "ENSE00002180175.1"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
189 chrY HAVANA exon 1595384 1595532 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 3; exon_id "ENSE00001296181.1"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
190 chrY HAVANA CDS 1595384 1595532 . + 0 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 3; exon_id "ENSE00001296181.1"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
191 chrY HAVANA exon 1599192 1599432 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 4; exon_id "ENSE00001153230.1"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
192 chrY HAVANA CDS 1599192 1599432 . + 1 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 4; exon_id "ENSE00001153230.1"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
193 chrY HAVANA exon 1600659 1602520 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 5; exon_id "ENSE00001826440.2"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
194 chrY HAVANA CDS 1600659 1601591 . + 0 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 5; exon_id "ENSE00001826440.2"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
195 chrY HAVANA stop_codon 1601592 1601594 . + 0 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 5; exon_id "ENSE00001826440.2"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
196 chrY HAVANA UTR 1591604 1591769 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 1; exon_id "ENSE00001297134.5"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
197 chrY HAVANA UTR 1593444 1593462 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 2; exon_id "ENSE00002180175.1"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
198 chrY HAVANA UTR 1601592 1602520 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000313871.9_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-201"; exon_number 5; exon_id "ENSE00001826440.2"; level 2; protein_id "ENSP00000324827.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14116.1"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055609.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
199 chrY HAVANA transcript 1591625 1600303 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
200 chrY HAVANA exon 1591625 1591769 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 1; exon_id "ENSE00001926957.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
201 chrY HAVANA exon 1593444 1594224 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 2; exon_id "ENSE00002180175.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
202 chrY HAVANA CDS 1593463 1594224 . + 0 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 2; exon_id "ENSE00002180175.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
203 chrY HAVANA start_codon 1593463 1593465 . + 0 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 2; exon_id "ENSE00002180175.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
204 chrY HAVANA exon 1595384 1595532 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 3; exon_id "ENSE00001296181.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
205 chrY HAVANA CDS 1595384 1595532 . + 0 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 3; exon_id "ENSE00001296181.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
206 chrY HAVANA exon 1599192 1600303 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 4; exon_id "ENSE00001945543.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
207 chrY HAVANA CDS 1599192 1599618 . + 1 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 4; exon_id "ENSE00001945543.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
208 chrY HAVANA stop_codon 1599619 1599621 . + 0 gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 4; exon_id "ENSE00001945543.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
209 chrY HAVANA UTR 1591625 1591769 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 1; exon_id "ENSE00001926957.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
210 chrY HAVANA UTR 1593444 1593462 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 2; exon_id "ENSE00002180175.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
211 chrY HAVANA UTR 1599619 1600303 . + . gene_id "ENSG00000197976.12_PAR_Y"; transcript_id "ENST00000381261.8_PAR_Y"; gene_type "protein_coding"; gene_name "AKAP17A"; transcript_type "protein_coding"; transcript_name "AKAP17A-202"; exon_number 4; exon_id "ENSE00001945543.1"; level 2; protein_id "ENSP00000370660.3"; transcript_support_level "1"; hgnc_id "HGNC:18783"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021063.4"; havana_transcript "OTTHUMT00000055608.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
212 chrY HAVANA gene 1615059 1643081 . + . gene_id "ENSG00000196433.13_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; level 2; hgnc_id "HGNC:750"; tag "PAR"; havana_gene "OTTHUMG00000021065.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
213 chrY HAVANA transcript 1615059 1643081 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
214 chrY HAVANA exon 1615059 1615268 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 1; exon_id "ENSE00001927792.2"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
215 chrY HAVANA CDS 1615200 1615268 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 1; exon_id "ENSE00001927792.2"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
216 chrY HAVANA start_codon 1615200 1615202 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 1; exon_id "ENSE00001927792.2"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
217 chrY HAVANA exon 1623139 1623313 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 2; exon_id "ENSE00001153223.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
218 chrY HAVANA CDS 1623139 1623313 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 2; exon_id "ENSE00001153223.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
219 chrY HAVANA exon 1624269 1624398 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 3; exon_id "ENSE00001328959.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
220 chrY HAVANA CDS 1624269 1624398 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 3; exon_id "ENSE00001328959.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
221 chrY HAVANA exon 1627703 1627771 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 4; exon_id "ENSE00001303750.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
222 chrY HAVANA CDS 1627703 1627771 . + 1 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 4; exon_id "ENSE00001303750.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
223 chrY HAVANA exon 1629821 1629939 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 5; exon_id "ENSE00001203622.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
224 chrY HAVANA CDS 1629821 1629939 . + 1 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 5; exon_id "ENSE00001203622.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
225 chrY HAVANA exon 1632704 1632787 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 6; exon_id "ENSE00001598652.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
226 chrY HAVANA CDS 1632704 1632787 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 6; exon_id "ENSE00001598652.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
227 chrY HAVANA exon 1633150 1633290 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 7; exon_id "ENSE00001203617.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
228 chrY HAVANA CDS 1633150 1633290 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 7; exon_id "ENSE00001203617.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
229 chrY HAVANA exon 1636438 1636560 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 8; exon_id "ENSE00001122491.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
230 chrY HAVANA CDS 1636438 1636560 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 8; exon_id "ENSE00001122491.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
231 chrY HAVANA exon 1642803 1643081 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 9; exon_id "ENSE00001700403.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
232 chrY HAVANA CDS 1642803 1643011 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 9; exon_id "ENSE00001700403.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
233 chrY HAVANA stop_codon 1643012 1643014 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 9; exon_id "ENSE00001700403.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
234 chrY HAVANA UTR 1615059 1615199 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 1; exon_id "ENSE00001927792.2"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
235 chrY HAVANA UTR 1643012 1643081 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381241.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-203"; exon_number 9; exon_id "ENSE00001700403.1"; level 2; protein_id "ENSP00000370639.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14117.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055611.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
236 chrY HAVANA transcript 1615164 1643027 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
237 chrY HAVANA exon 1615164 1615268 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 1; exon_id "ENSE00001535323.3"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
238 chrY HAVANA CDS 1615200 1615268 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 1; exon_id "ENSE00001535323.3"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
239 chrY HAVANA start_codon 1615200 1615202 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 1; exon_id "ENSE00001535323.3"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
240 chrY HAVANA exon 1623139 1623313 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 2; exon_id "ENSE00001153223.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
241 chrY HAVANA CDS 1623139 1623313 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 2; exon_id "ENSE00001153223.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
242 chrY HAVANA exon 1624269 1624398 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 3; exon_id "ENSE00001328959.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
243 chrY HAVANA CDS 1624269 1624398 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 3; exon_id "ENSE00001328959.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
244 chrY HAVANA exon 1627703 1627771 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 4; exon_id "ENSE00001303750.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
245 chrY HAVANA CDS 1627703 1627771 . + 1 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 4; exon_id "ENSE00001303750.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
246 chrY HAVANA exon 1629821 1629939 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 5; exon_id "ENSE00001203622.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
247 chrY HAVANA CDS 1629821 1629939 . + 1 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 5; exon_id "ENSE00001203622.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
248 chrY HAVANA exon 1633150 1633290 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 6; exon_id "ENSE00001203617.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
249 chrY HAVANA CDS 1633150 1633290 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 6; exon_id "ENSE00001203617.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
250 chrY HAVANA exon 1636438 1636560 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 7; exon_id "ENSE00001122491.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
251 chrY HAVANA CDS 1636438 1636560 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 7; exon_id "ENSE00001122491.1"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
252 chrY HAVANA exon 1642803 1643027 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 8; exon_id "ENSE00001487919.3"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
253 chrY HAVANA CDS 1642803 1643011 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 8; exon_id "ENSE00001487919.3"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
254 chrY HAVANA stop_codon 1643012 1643014 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 8; exon_id "ENSE00001487919.3"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
255 chrY HAVANA UTR 1615164 1615199 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 1; exon_id "ENSE00001535323.3"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
256 chrY HAVANA UTR 1643012 1643027 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381229.9_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-201"; exon_number 8; exon_id "ENSE00001487919.3"; level 2; protein_id "ENSP00000370627.4"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "appris_principal_1"; tag "PAR"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055612.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
257 chrY HAVANA transcript 1615175 1643081 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
258 chrY HAVANA exon 1615175 1615268 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 1; exon_id "ENSE00001905586.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
259 chrY HAVANA CDS 1615200 1615268 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 1; exon_id "ENSE00001905586.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
260 chrY HAVANA start_codon 1615200 1615202 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 1; exon_id "ENSE00001905586.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
261 chrY HAVANA exon 1623139 1623313 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 2; exon_id "ENSE00001153223.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
262 chrY HAVANA CDS 1623139 1623313 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 2; exon_id "ENSE00001153223.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
263 chrY HAVANA exon 1624269 1624398 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 3; exon_id "ENSE00001328959.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
264 chrY HAVANA CDS 1624269 1624398 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 3; exon_id "ENSE00001328959.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
265 chrY HAVANA exon 1627703 1627771 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 4; exon_id "ENSE00001303750.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
266 chrY HAVANA CDS 1627703 1627771 . + 1 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 4; exon_id "ENSE00001303750.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
267 chrY HAVANA exon 1629821 1629939 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 5; exon_id "ENSE00001203622.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
268 chrY HAVANA CDS 1629821 1629939 . + 1 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 5; exon_id "ENSE00001203622.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
269 chrY HAVANA exon 1636438 1636560 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 6; exon_id "ENSE00001122491.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
270 chrY HAVANA CDS 1636438 1636560 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 6; exon_id "ENSE00001122491.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
271 chrY HAVANA exon 1642803 1643081 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 7; exon_id "ENSE00001700403.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
272 chrY HAVANA CDS 1642803 1643011 . + 2 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 7; exon_id "ENSE00001700403.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
273 chrY HAVANA stop_codon 1643012 1643014 . + 0 gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 7; exon_id "ENSE00001700403.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
274 chrY HAVANA UTR 1615175 1615199 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 1; exon_id "ENSE00001905586.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
275 chrY HAVANA UTR 1643012 1643081 . + . gene_id "ENSG00000196433.13_PAR_Y"; transcript_id "ENST00000381233.8_PAR_Y"; gene_type "protein_coding"; gene_name "ASMT"; transcript_type "protein_coding"; transcript_name "ASMT-202"; exon_number 7; exon_id "ENSE00001700403.1"; level 2; protein_id "ENSP00000370631.3"; transcript_support_level "1"; hgnc_id "HGNC:750"; tag "basic"; tag "CCDS"; tag "PAR"; ccdsid "CCDS55364.1"; havana_gene "OTTHUMG00000021065.3"; havana_transcript "OTTHUMT00000055613.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
276 chrY HAVANA gene 1661795 1662306 . + . gene_id "ENSG00000289620.2_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289620"; level 2; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
277 chrY HAVANA transcript 1661795 1662306 . + . gene_id "ENSG00000289620.2_PAR_Y"; transcript_id "ENST00000691936.2_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289620"; transcript_type "lncRNA"; transcript_name "ENST00000691936"; level 2; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
278 chrY HAVANA exon 1661795 1662052 . + . gene_id "ENSG00000289620.2_PAR_Y"; transcript_id "ENST00000691936.2_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289620"; transcript_type "lncRNA"; transcript_name "ENST00000691936"; exon_number 1; exon_id "ENSE00003981199.1"; level 2; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
279 chrY HAVANA exon 1662161 1662306 . + . gene_id "ENSG00000289620.2_PAR_Y"; transcript_id "ENST00000691936.2_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289620"; transcript_type "lncRNA"; transcript_name "ENST00000691936"; exon_number 2; exon_id "ENSE00003933317.1"; level 2; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
280 chrY HAVANA gene 1732584 1763212 . + . gene_id "ENSG00000223511.7_PAR_Y"; gene_type "lncRNA"; gene_name "LINC02968"; level 2; hgnc_id "HGNC:56008"; tag "PAR"; havana_gene "OTTHUMG00000021062.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
281 chrY HAVANA transcript 1732584 1741988 . + . gene_id "ENSG00000223511.7_PAR_Y"; transcript_id "ENST00000427886.6_PAR_Y"; gene_type "lncRNA"; gene_name "LINC02968"; transcript_type "lncRNA"; transcript_name "LINC02968-201"; level 2; transcript_support_level "2"; hgnc_id "HGNC:56008"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021062.3"; havana_transcript "OTTHUMT00000055605.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
282 chrY HAVANA exon 1732584 1732723 . + . gene_id "ENSG00000223511.7_PAR_Y"; transcript_id "ENST00000427886.6_PAR_Y"; gene_type "lncRNA"; gene_name "LINC02968"; transcript_type "lncRNA"; transcript_name "LINC02968-201"; exon_number 1; exon_id "ENSE00001786966.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:56008"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021062.3"; havana_transcript "OTTHUMT00000055605.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
283 chrY HAVANA exon 1733950 1734196 . + . gene_id "ENSG00000223511.7_PAR_Y"; transcript_id "ENST00000427886.6_PAR_Y"; gene_type "lncRNA"; gene_name "LINC02968"; transcript_type "lncRNA"; transcript_name "LINC02968-201"; exon_number 2; exon_id "ENSE00001716526.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:56008"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021062.3"; havana_transcript "OTTHUMT00000055605.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
284 chrY HAVANA exon 1741931 1741988 . + . gene_id "ENSG00000223511.7_PAR_Y"; transcript_id "ENST00000427886.6_PAR_Y"; gene_type "lncRNA"; gene_name "LINC02968"; transcript_type "lncRNA"; transcript_name "LINC02968-201"; exon_number 3; exon_id "ENSE00001723831.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:56008"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021062.3"; havana_transcript "OTTHUMT00000055605.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
285 chrY HAVANA transcript 1734117 1763212 . + . gene_id "ENSG00000223511.7_PAR_Y"; transcript_id "ENST00000432272.7_PAR_Y"; gene_type "lncRNA"; gene_name "LINC02968"; transcript_type "lncRNA"; transcript_name "LINC02968-202"; level 2; transcript_support_level "2"; hgnc_id "HGNC:56008"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021062.3"; havana_transcript "OTTHUMT00000055606.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
286 chrY HAVANA exon 1734117 1734196 . + . gene_id "ENSG00000223511.7_PAR_Y"; transcript_id "ENST00000432272.7_PAR_Y"; gene_type "lncRNA"; gene_name "LINC02968"; transcript_type "lncRNA"; transcript_name "LINC02968-202"; exon_number 1; exon_id "ENSE00001752639.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:56008"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021062.3"; havana_transcript "OTTHUMT00000055606.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
287 chrY HAVANA exon 1755684 1755985 . + . gene_id "ENSG00000223511.7_PAR_Y"; transcript_id "ENST00000432272.7_PAR_Y"; gene_type "lncRNA"; gene_name "LINC02968"; transcript_type "lncRNA"; transcript_name "LINC02968-202"; exon_number 2; exon_id "ENSE00001667046.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:56008"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021062.3"; havana_transcript "OTTHUMT00000055606.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
288 chrY HAVANA exon 1762959 1763212 . + . gene_id "ENSG00000223511.7_PAR_Y"; transcript_id "ENST00000432272.7_PAR_Y"; gene_type "lncRNA"; gene_name "LINC02968"; transcript_type "lncRNA"; transcript_name "LINC02968-202"; exon_number 3; exon_id "ENSE00003828212.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:56008"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021062.3"; havana_transcript "OTTHUMT00000055606.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
289 chrY HAVANA gene 1767347 1768776 . + . gene_id "ENSG00000234622.6_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000234622"; level 2; tag "PAR"; havana_gene "OTTHUMG00000021064.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
290 chrY HAVANA transcript 1767347 1768776 . + . gene_id "ENSG00000234622.6_PAR_Y"; transcript_id "ENST00000453953.6_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000234622"; transcript_type "lncRNA"; transcript_name "ENST00000453953"; level 2; transcript_support_level "2"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021064.1"; havana_transcript "OTTHUMT00000055610.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
291 chrY HAVANA exon 1767347 1767552 . + . gene_id "ENSG00000234622.6_PAR_Y"; transcript_id "ENST00000453953.6_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000234622"; transcript_type "lncRNA"; transcript_name "ENST00000453953"; exon_number 1; exon_id "ENSE00001777435.1"; level 2; transcript_support_level "2"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021064.1"; havana_transcript "OTTHUMT00000055610.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
292 chrY HAVANA exon 1768435 1768776 . + . gene_id "ENSG00000234622.6_PAR_Y"; transcript_id "ENST00000453953.6_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000234622"; transcript_type "lncRNA"; transcript_name "ENST00000453953"; exon_number 2; exon_id "ENSE00001632295.1"; level 2; transcript_support_level "2"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021064.1"; havana_transcript "OTTHUMT00000055610.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
293 chrY HAVANA gene 2219506 2502805 . - . gene_id "ENSG00000169084.15_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; level 2; hgnc_id "HGNC:18399"; tag "overlapping_locus"; tag "PAR"; havana_gene "OTTHUMG00000021068.6";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
294 chrY HAVANA transcript 2219506 2500976 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
295 chrY HAVANA exon 2500817 2500976 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 1; exon_id "ENSE00001679842.3"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
296 chrY HAVANA CDS 2500817 2500925 . - 0 gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 1; exon_id "ENSE00001679842.3"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
297 chrY HAVANA start_codon 2500923 2500925 . - 0 gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 1; exon_id "ENSE00001679842.3"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
298 chrY HAVANA exon 2425197 2425304 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 2; exon_id "ENSE00003549694.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
299 chrY HAVANA CDS 2425197 2425304 . - 2 gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 2; exon_id "ENSE00003549694.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
300 chrY HAVANA exon 2408745 2408813 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 3; exon_id "ENSE00003638780.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
301 chrY HAVANA CDS 2408745 2408813 . - 2 gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 3; exon_id "ENSE00003638780.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
302 chrY HAVANA exon 2291502 2291603 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 4; exon_id "ENSE00003532451.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
303 chrY HAVANA CDS 2291502 2291603 . - 2 gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 4; exon_id "ENSE00003532451.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
304 chrY HAVANA exon 2266740 2266947 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 5; exon_id "ENSE00001761946.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
305 chrY HAVANA CDS 2266740 2266947 . - 2 gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 5; exon_id "ENSE00001761946.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
306 chrY HAVANA exon 2243023 2243230 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 6; exon_id "ENSE00001931920.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
307 chrY HAVANA CDS 2243023 2243230 . - 1 gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 6; exon_id "ENSE00001931920.1"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
308 chrY HAVANA exon 2219506 2221229 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 7; exon_id "ENSE00001487873.2"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
309 chrY HAVANA CDS 2221044 2221229 . - 0 gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 7; exon_id "ENSE00001487873.2"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
310 chrY HAVANA stop_codon 2221041 2221043 . - 0 gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 7; exon_id "ENSE00001487873.2"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
311 chrY HAVANA UTR 2500926 2500976 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 1; exon_id "ENSE00001679842.3"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
312 chrY HAVANA UTR 2219506 2221043 . - . gene_id "ENSG00000169084.15_PAR_Y"; transcript_id "ENST00000334651.11_PAR_Y"; gene_type "protein_coding"; gene_name "DHRSX"; transcript_type "protein_coding"; transcript_name "DHRSX-201"; exon_number 7; exon_id "ENSE00001487873.2"; level 2; protein_id "ENSP00000334113.5"; transcript_support_level "1"; hgnc_id "HGNC:18399"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS35195.1"; havana_gene "OTTHUMG00000021068.6"; havana_transcript "OTTHUMT00000055617.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
313 chrY HAVANA gene 2334295 2336410 . - . gene_id "ENSG00000223571.6_PAR_Y"; gene_type "lncRNA"; gene_name "DHRSX-IT1"; level 2; hgnc_id "HGNC:38713"; tag "overlapping_locus"; tag "PAR"; havana_gene "OTTHUMG00000067406.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
314 chrY HAVANA transcript 2334295 2336410 . - . gene_id "ENSG00000223571.6_PAR_Y"; transcript_id "ENST00000437244.6_PAR_Y"; gene_type "lncRNA"; gene_name "DHRSX-IT1"; transcript_type "lncRNA"; transcript_name "DHRSX-IT1-201"; level 2; transcript_support_level "5"; hgnc_id "HGNC:38713"; tag "mRNA_end_NF"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000067406.1"; havana_transcript "OTTHUMT00000144311.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
315 chrY HAVANA exon 2336385 2336410 . - . gene_id "ENSG00000223571.6_PAR_Y"; transcript_id "ENST00000437244.6_PAR_Y"; gene_type "lncRNA"; gene_name "DHRSX-IT1"; transcript_type "lncRNA"; transcript_name "DHRSX-IT1-201"; exon_number 1; exon_id "ENSE00001671219.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:38713"; tag "mRNA_end_NF"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000067406.1"; havana_transcript "OTTHUMT00000144311.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
316 chrY HAVANA exon 2334295 2334919 . - . gene_id "ENSG00000223571.6_PAR_Y"; transcript_id "ENST00000437244.6_PAR_Y"; gene_type "lncRNA"; gene_name "DHRSX-IT1"; transcript_type "lncRNA"; transcript_name "DHRSX-IT1-201"; exon_number 2; exon_id "ENSE00001662254.1"; level 2; transcript_support_level "5"; hgnc_id "HGNC:38713"; tag "mRNA_end_NF"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000067406.1"; havana_transcript "OTTHUMT00000144311.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
317 chrY HAVANA gene 2486414 2500976 . - . gene_id "ENSG00000214717.12_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; level 2; hgnc_id "HGNC:447"; tag "overlapping_locus"; tag "PAR"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
318 chrY HAVANA transcript 2486414 2500967 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381222.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-202"; level 2; protein_id "ENSP00000370620.2"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000055619.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
319 chrY HAVANA exon 2500817 2500967 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381222.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-202"; exon_number 1; exon_id "ENSE00001413450.1"; level 2; protein_id "ENSP00000370620.2"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000055619.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
320 chrY HAVANA exon 2486414 2490769 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381222.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-202"; exon_number 2; exon_id "ENSE00001487860.3"; level 2; protein_id "ENSP00000370620.2"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000055619.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
321 chrY HAVANA CDS 2488638 2490719 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381222.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-202"; exon_number 2; exon_id "ENSE00001487860.3"; level 2; protein_id "ENSP00000370620.2"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000055619.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
322 chrY HAVANA start_codon 2490717 2490719 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381222.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-202"; exon_number 2; exon_id "ENSE00001487860.3"; level 2; protein_id "ENSP00000370620.2"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000055619.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
323 chrY HAVANA stop_codon 2488635 2488637 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381222.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-202"; exon_number 2; exon_id "ENSE00001487860.3"; level 2; protein_id "ENSP00000370620.2"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000055619.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
324 chrY HAVANA UTR 2500817 2500967 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381222.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-202"; exon_number 1; exon_id "ENSE00001413450.1"; level 2; protein_id "ENSP00000370620.2"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000055619.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
325 chrY HAVANA UTR 2486414 2488637 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381222.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-202"; exon_number 2; exon_id "ENSE00001487860.3"; level 2; protein_id "ENSP00000370620.2"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000055619.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
326 chrY HAVANA UTR 2490720 2490769 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381222.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-202"; exon_number 2; exon_id "ENSE00001487860.3"; level 2; protein_id "ENSP00000370620.2"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000055619.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
327 chrY ENSEMBL transcript 2486414 2500967 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381223.9_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-203"; level 3; protein_id "ENSP00000370621.4"; transcript_support_level "2"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
328 chrY ENSEMBL exon 2500817 2500967 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381223.9_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-203"; exon_number 1; exon_id "ENSE00001413450.1"; level 3; protein_id "ENSP00000370621.4"; transcript_support_level "2"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
329 chrY ENSEMBL exon 2486414 2490772 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381223.9_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-203"; exon_number 2; exon_id "ENSE00002295224.1"; level 3; protein_id "ENSP00000370621.4"; transcript_support_level "2"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
330 chrY ENSEMBL CDS 2488638 2490719 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381223.9_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-203"; exon_number 2; exon_id "ENSE00002295224.1"; level 3; protein_id "ENSP00000370621.4"; transcript_support_level "2"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
331 chrY ENSEMBL start_codon 2490717 2490719 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381223.9_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-203"; exon_number 2; exon_id "ENSE00002295224.1"; level 3; protein_id "ENSP00000370621.4"; transcript_support_level "2"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
332 chrY ENSEMBL stop_codon 2488635 2488637 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381223.9_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-203"; exon_number 2; exon_id "ENSE00002295224.1"; level 3; protein_id "ENSP00000370621.4"; transcript_support_level "2"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
333 chrY ENSEMBL UTR 2500817 2500967 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381223.9_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-203"; exon_number 1; exon_id "ENSE00001413450.1"; level 3; protein_id "ENSP00000370621.4"; transcript_support_level "2"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
334 chrY ENSEMBL UTR 2486414 2488637 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381223.9_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-203"; exon_number 2; exon_id "ENSE00002295224.1"; level 3; protein_id "ENSP00000370621.4"; transcript_support_level "2"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
335 chrY ENSEMBL UTR 2490720 2490772 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381223.9_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-203"; exon_number 2; exon_id "ENSE00002295224.1"; level 3; protein_id "ENSP00000370621.4"; transcript_support_level "2"; hgnc_id "HGNC:447"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
336 chrY HAVANA transcript 2486435 2500976 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000652001.1_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-206"; level 2; protein_id "ENSP00000498725.1"; hgnc_id "HGNC:447"; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000504213.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
337 chrY HAVANA exon 2500817 2500976 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000652001.1_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-206"; exon_number 1; exon_id "ENSE00003850567.1"; level 2; protein_id "ENSP00000498725.1"; hgnc_id "HGNC:447"; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000504213.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
338 chrY HAVANA exon 2486435 2490772 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000652001.1_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-206"; exon_number 2; exon_id "ENSE00003847015.1"; level 2; protein_id "ENSP00000498725.1"; hgnc_id "HGNC:447"; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000504213.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
339 chrY HAVANA CDS 2488638 2490719 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000652001.1_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-206"; exon_number 2; exon_id "ENSE00003847015.1"; level 2; protein_id "ENSP00000498725.1"; hgnc_id "HGNC:447"; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000504213.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
340 chrY HAVANA start_codon 2490717 2490719 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000652001.1_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-206"; exon_number 2; exon_id "ENSE00003847015.1"; level 2; protein_id "ENSP00000498725.1"; hgnc_id "HGNC:447"; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000504213.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
341 chrY HAVANA stop_codon 2488635 2488637 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000652001.1_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-206"; exon_number 2; exon_id "ENSE00003847015.1"; level 2; protein_id "ENSP00000498725.1"; hgnc_id "HGNC:447"; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000504213.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
342 chrY HAVANA UTR 2500817 2500976 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000652001.1_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-206"; exon_number 1; exon_id "ENSE00003850567.1"; level 2; protein_id "ENSP00000498725.1"; hgnc_id "HGNC:447"; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000504213.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
343 chrY HAVANA UTR 2486435 2488637 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000652001.1_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-206"; exon_number 2; exon_id "ENSE00003847015.1"; level 2; protein_id "ENSP00000498725.1"; hgnc_id "HGNC:447"; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000504213.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
344 chrY HAVANA UTR 2490720 2490772 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000652001.1_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-206"; exon_number 2; exon_id "ENSE00003847015.1"; level 2; protein_id "ENSP00000498725.1"; hgnc_id "HGNC:447"; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000504213.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
345 chrY HAVANA transcript 2488186 2500555 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381218.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-201"; level 2; protein_id "ENSP00000370616.3"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000144310.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
346 chrY HAVANA exon 2500311 2500555 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381218.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-201"; exon_number 1; exon_id "ENSE00001338884.2"; level 2; protein_id "ENSP00000370616.3"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000144310.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
347 chrY HAVANA exon 2488186 2490772 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381218.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-201"; exon_number 2; exon_id "ENSE00001285055.6"; level 2; protein_id "ENSP00000370616.3"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000144310.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
348 chrY HAVANA CDS 2488638 2490719 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381218.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-201"; exon_number 2; exon_id "ENSE00001285055.6"; level 2; protein_id "ENSP00000370616.3"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000144310.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
349 chrY HAVANA start_codon 2490717 2490719 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381218.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-201"; exon_number 2; exon_id "ENSE00001285055.6"; level 2; protein_id "ENSP00000370616.3"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000144310.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
350 chrY HAVANA stop_codon 2488635 2488637 . - 0 gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381218.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-201"; exon_number 2; exon_id "ENSE00001285055.6"; level 2; protein_id "ENSP00000370616.3"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000144310.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
351 chrY HAVANA UTR 2500311 2500555 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381218.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-201"; exon_number 1; exon_id "ENSE00001338884.2"; level 2; protein_id "ENSP00000370616.3"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000144310.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
352 chrY HAVANA UTR 2488186 2488637 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381218.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-201"; exon_number 2; exon_id "ENSE00001285055.6"; level 2; protein_id "ENSP00000370616.3"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000144310.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
353 chrY HAVANA UTR 2490720 2490772 . - . gene_id "ENSG00000214717.12_PAR_Y"; transcript_id "ENST00000381218.8_PAR_Y"; gene_type "protein_coding"; gene_name "ZBED1"; transcript_type "protein_coding"; transcript_name "ZBED1-201"; exon_number 2; exon_id "ENSE00001285055.6"; level 2; protein_id "ENSP00000370616.3"; transcript_support_level "1"; hgnc_id "HGNC:447"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14118.1"; havana_gene "OTTHUMG00000021069.10"; havana_transcript "OTTHUMT00000144310.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
354 chrY HAVANA gene 2566024 2609207 . - . gene_id "ENSG00000289007.2_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289007"; level 2; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
355 chrY HAVANA transcript 2566029 2609168 . - . gene_id "ENSG00000289007.2_PAR_Y"; transcript_id "ENST00000688481.1_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289007"; transcript_type "lncRNA"; transcript_name "ENST00000688481"; level 2; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
356 chrY HAVANA exon 2609106 2609168 . - . gene_id "ENSG00000289007.2_PAR_Y"; transcript_id "ENST00000688481.1_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289007"; transcript_type "lncRNA"; transcript_name "ENST00000688481"; exon_number 1; exon_id "ENSE00003937924.1"; level 2; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
357 chrY HAVANA exon 2574096 2574289 . - . gene_id "ENSG00000289007.2_PAR_Y"; transcript_id "ENST00000688481.1_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289007"; transcript_type "lncRNA"; transcript_name "ENST00000688481"; exon_number 2; exon_id "ENSE00003931496.1"; level 2; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
358 chrY HAVANA exon 2570011 2570166 . - . gene_id "ENSG00000289007.2_PAR_Y"; transcript_id "ENST00000688481.1_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289007"; transcript_type "lncRNA"; transcript_name "ENST00000688481"; exon_number 3; exon_id "ENSE00003928798.1"; level 2; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
359 chrY HAVANA exon 2566029 2567292 . - . gene_id "ENSG00000289007.2_PAR_Y"; transcript_id "ENST00000688481.1_PAR_Y"; gene_type "lncRNA"; gene_name "ENSG00000289007"; transcript_type "lncRNA"; transcript_name "ENST00000688481"; exon_number 4; exon_id "ENSE00003925256.1"; level 2; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
360 chrY ENSEMBL gene 2609191 2609254 . + . gene_id "ENSG00000277120.5_PAR_Y"; gene_type "miRNA"; gene_name "MIR6089"; level 3; hgnc_id "HGNC:50179"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
361 chrY ENSEMBL transcript 2609191 2609254 . + . gene_id "ENSG00000277120.5_PAR_Y"; transcript_id "ENST00000616698.5_PAR_Y"; gene_type "miRNA"; gene_name "MIR6089"; transcript_type "miRNA"; transcript_name "MIR6089-201"; level 3; transcript_support_level "NA"; hgnc_id "HGNC:50179"; tag "basic"; tag "Ensembl_canonical"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
362 chrY ENSEMBL exon 2609191 2609254 . + . gene_id "ENSG00000277120.5_PAR_Y"; transcript_id "ENST00000616698.5_PAR_Y"; gene_type "miRNA"; gene_name "MIR6089"; transcript_type "miRNA"; transcript_name "MIR6089-201"; exon_number 1; exon_id "ENSE00003731641.1"; level 3; transcript_support_level "NA"; hgnc_id "HGNC:50179"; tag "basic"; tag "Ensembl_canonical"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
363 chrY HAVANA gene 2609340 2658924 . + . gene_id "ENSG00000291040.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; level 2; hgnc_id "HGNC:7083"; tag "overlaps_pseudogene"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
364 chrY HAVANA transcript 2609340 2638329 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
365 chrY HAVANA exon 2609340 2609481 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; exon_number 1; exon_id "ENSE00003928562.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
366 chrY HAVANA exon 2610996 2611038 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; exon_number 2; exon_id "ENSE00003998977.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
367 chrY HAVANA exon 2612150 2612218 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; exon_number 3; exon_id "ENSE00003998712.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
368 chrY HAVANA exon 2615816 2615969 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; exon_number 4; exon_id "ENSE00003998922.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
369 chrY HAVANA exon 2618740 2618784 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; exon_number 5; exon_id "ENSE00003998884.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
370 chrY HAVANA exon 2619429 2619497 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; exon_number 6; exon_id "ENSE00003998910.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
371 chrY HAVANA exon 2622690 2623453 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; exon_number 7; exon_id "ENSE00003930184.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
372 chrY HAVANA exon 2626597 2626642 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; exon_number 8; exon_id "ENSE00001748020.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
373 chrY HAVANA exon 2637974 2638329 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000691003.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-209"; exon_number 9; exon_id "ENSE00001717203.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
374 chrY HAVANA transcript 2609348 2616171 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000431582.6_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-204"; level 2; transcript_support_level "4"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000337678.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
375 chrY HAVANA exon 2609348 2609481 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000431582.6_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-204"; exon_number 1; exon_id "ENSE00001679483.1"; level 2; transcript_support_level "4"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000337678.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
376 chrY HAVANA exon 2610996 2611038 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000431582.6_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-204"; exon_number 2; exon_id "ENSE00003998977.1"; level 2; transcript_support_level "4"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000337678.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
377 chrY HAVANA exon 2612150 2612218 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000431582.6_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-204"; exon_number 3; exon_id "ENSE00003998712.1"; level 2; transcript_support_level "4"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000337678.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
378 chrY HAVANA exon 2615816 2616171 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000431582.6_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-204"; exon_number 4; exon_id "ENSE00001604470.1"; level 2; transcript_support_level "4"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000337678.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
379 chrY HAVANA transcript 2609348 2638329 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
380 chrY HAVANA exon 2609348 2609481 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 1; exon_id "ENSE00001679483.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
381 chrY HAVANA exon 2610996 2611038 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 2; exon_id "ENSE00003998977.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
382 chrY HAVANA exon 2612150 2612218 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 3; exon_id "ENSE00003998712.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
383 chrY HAVANA exon 2615816 2615969 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 4; exon_id "ENSE00003998922.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
384 chrY HAVANA exon 2618740 2618784 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 5; exon_id "ENSE00003998884.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
385 chrY HAVANA exon 2619429 2619497 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 6; exon_id "ENSE00003998910.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
386 chrY HAVANA exon 2622690 2622734 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 7; exon_id "ENSE00003998955.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
387 chrY HAVANA exon 2623385 2623453 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 8; exon_id "ENSE00003998962.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
388 chrY HAVANA exon 2626597 2626642 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 9; exon_id "ENSE00001748020.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
389 chrY HAVANA exon 2637974 2638329 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000430562.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-203"; exon_number 10; exon_id "ENSE00001717203.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR"; havana_transcript "OTTHUMT00000055621.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
390 chrY HAVANA transcript 2609374 2638329 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
391 chrY HAVANA exon 2609374 2609481 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; exon_number 1; exon_id "ENSE00002165088.2"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
392 chrY HAVANA exon 2610996 2611038 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; exon_number 2; exon_id "ENSE00003998977.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
393 chrY HAVANA exon 2612150 2612218 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; exon_number 3; exon_id "ENSE00003998712.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
394 chrY HAVANA exon 2615816 2615969 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; exon_number 4; exon_id "ENSE00003998922.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
395 chrY HAVANA exon 2618758 2618784 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; exon_number 5; exon_id "ENSE00003923017.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
396 chrY HAVANA exon 2619429 2619497 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; exon_number 6; exon_id "ENSE00003998910.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
397 chrY HAVANA exon 2623385 2623453 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; exon_number 7; exon_id "ENSE00003998962.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
398 chrY HAVANA exon 2626597 2626642 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; exon_number 8; exon_id "ENSE00001748020.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
399 chrY HAVANA exon 2637974 2638329 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000689252.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-208"; exon_number 9; exon_id "ENSE00001717203.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
400 chrY HAVANA transcript 2609381 2638329 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
401 chrY HAVANA exon 2609381 2609481 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; exon_number 1; exon_id "ENSE00001662166.2"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
402 chrY HAVANA exon 2610996 2611038 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; exon_number 2; exon_id "ENSE00003998977.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
403 chrY HAVANA exon 2612150 2612218 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; exon_number 3; exon_id "ENSE00003998712.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
404 chrY HAVANA exon 2615816 2615969 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; exon_number 4; exon_id "ENSE00003998922.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
405 chrY HAVANA exon 2618740 2618784 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; exon_number 5; exon_id "ENSE00003998884.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
406 chrY HAVANA exon 2619429 2619497 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; exon_number 6; exon_id "ENSE00003998910.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
407 chrY HAVANA exon 2623385 2623453 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; exon_number 7; exon_id "ENSE00003998962.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
408 chrY HAVANA exon 2626597 2626642 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; exon_number 8; exon_id "ENSE00001748020.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
409 chrY HAVANA exon 2637974 2638329 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000685470.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-206"; exon_number 9; exon_id "ENSE00001717203.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
410 chrY HAVANA transcript 2609381 2658909 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
411 chrY HAVANA exon 2609381 2609481 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 1; exon_id "ENSE00001662166.2"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
412 chrY HAVANA exon 2610996 2611038 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 2; exon_id "ENSE00003998977.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
413 chrY HAVANA exon 2612150 2612218 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 3; exon_id "ENSE00003998712.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
414 chrY HAVANA exon 2615816 2615969 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 4; exon_id "ENSE00003998922.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
415 chrY HAVANA exon 2618740 2618784 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 5; exon_id "ENSE00003998884.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
416 chrY HAVANA exon 2619429 2619497 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 6; exon_id "ENSE00003998910.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
417 chrY HAVANA exon 2622690 2622734 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 7; exon_id "ENSE00003998955.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
418 chrY HAVANA exon 2623385 2623453 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 8; exon_id "ENSE00003998962.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
419 chrY HAVANA exon 2626597 2626642 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 9; exon_id "ENSE00001748020.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
420 chrY HAVANA exon 2658503 2658909 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000701084.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-210"; exon_number 10; exon_id "ENSE00003981752.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
421 chrY HAVANA transcript 2609381 2658924 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
422 chrY HAVANA exon 2609381 2609481 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; exon_number 1; exon_id "ENSE00001662166.2"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
423 chrY HAVANA exon 2610996 2611038 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; exon_number 2; exon_id "ENSE00003998977.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
424 chrY HAVANA exon 2612150 2612218 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; exon_number 3; exon_id "ENSE00003998712.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
425 chrY HAVANA exon 2618740 2618784 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; exon_number 4; exon_id "ENSE00003998884.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
426 chrY HAVANA exon 2619429 2619497 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; exon_number 5; exon_id "ENSE00003998910.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
427 chrY HAVANA exon 2622690 2622734 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; exon_number 6; exon_id "ENSE00003998955.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
428 chrY HAVANA exon 2623385 2623453 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; exon_number 7; exon_id "ENSE00003998962.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
429 chrY HAVANA exon 2626597 2626642 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; exon_number 8; exon_id "ENSE00001748020.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
430 chrY HAVANA exon 2658503 2658924 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000688123.1_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-207"; exon_number 9; exon_id "ENSE00003931641.1"; level 2; hgnc_id "HGNC:7083"; tag "basic"; tag "Ensembl_canonical"; tag "TAGENE"; tag "PAR";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
431 chrY HAVANA transcript 2609392 2657229 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
432 chrY HAVANA exon 2609392 2609481 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; exon_number 1; exon_id "ENSE00001621513.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
433 chrY HAVANA exon 2610996 2611038 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; exon_number 2; exon_id "ENSE00003998977.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
434 chrY HAVANA exon 2612150 2612218 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; exon_number 3; exon_id "ENSE00003998712.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
435 chrY HAVANA exon 2615816 2615969 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; exon_number 4; exon_id "ENSE00003998922.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
436 chrY HAVANA exon 2618740 2618784 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; exon_number 5; exon_id "ENSE00003998884.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
437 chrY HAVANA exon 2619429 2619497 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; exon_number 6; exon_id "ENSE00003998910.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
438 chrY HAVANA exon 2623385 2623453 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; exon_number 7; exon_id "ENSE00003998962.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
439 chrY HAVANA exon 2626597 2626642 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; exon_number 8; exon_id "ENSE00001748020.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
440 chrY HAVANA exon 2655027 2657229 . + . gene_id "ENSG00000291040.1_PAR_Y"; transcript_id "ENST00000435581.7_PAR_Y"; gene_type "lncRNA"; gene_name "CD99P1"; transcript_type "lncRNA"; transcript_name "CD99P1-205"; exon_number 9; exon_id "ENSE00001770465.1"; level 2; transcript_support_level "2"; hgnc_id "HGNC:7083"; tag "basic"; tag "PAR"; havana_transcript "OTTHUMT00000105117.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
441 chrY HAVANA gene 2609415 2623453 . + . gene_id "ENSG00000223773.10_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; level 2; hgnc_id "HGNC:7083"; tag "PAR"; havana_gene "OTTHUMG00000021071.4";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
442 chrY HAVANA transcript 2609415 2623453 . + . gene_id "ENSG00000223773.10_PAR_Y"; transcript_id "ENST00000527459.8_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "CD99P1-201"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:7083"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021071.4"; havana_transcript "OTTHUMT00000391899.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
443 chrY HAVANA exon 2609415 2609481 . + . gene_id "ENSG00000223773.10_PAR_Y"; transcript_id "ENST00000527459.8_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "CD99P1-201"; exon_number 1; exon_id "ENSE00003979169.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:7083"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021071.4"; havana_transcript "OTTHUMT00000391899.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
444 chrY HAVANA exon 2610996 2611038 . + . gene_id "ENSG00000223773.10_PAR_Y"; transcript_id "ENST00000527459.8_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "CD99P1-201"; exon_number 2; exon_id "ENSE00001762362.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:7083"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021071.4"; havana_transcript "OTTHUMT00000391899.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
445 chrY HAVANA exon 2612150 2612218 . + . gene_id "ENSG00000223773.10_PAR_Y"; transcript_id "ENST00000527459.8_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "CD99P1-201"; exon_number 3; exon_id "ENSE00001602254.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:7083"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021071.4"; havana_transcript "OTTHUMT00000391899.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
446 chrY HAVANA exon 2615816 2615969 . + . gene_id "ENSG00000223773.10_PAR_Y"; transcript_id "ENST00000527459.8_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "CD99P1-201"; exon_number 4; exon_id "ENSE00001730320.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:7083"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021071.4"; havana_transcript "OTTHUMT00000391899.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
447 chrY HAVANA exon 2618740 2618784 . + . gene_id "ENSG00000223773.10_PAR_Y"; transcript_id "ENST00000527459.8_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "CD99P1-201"; exon_number 5; exon_id "ENSE00001706343.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:7083"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021071.4"; havana_transcript "OTTHUMT00000391899.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
448 chrY HAVANA exon 2619429 2619497 . + . gene_id "ENSG00000223773.10_PAR_Y"; transcript_id "ENST00000527459.8_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "CD99P1-201"; exon_number 6; exon_id "ENSE00001722282.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:7083"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021071.4"; havana_transcript "OTTHUMT00000391899.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
449 chrY HAVANA exon 2622690 2622734 . + . gene_id "ENSG00000223773.10_PAR_Y"; transcript_id "ENST00000527459.8_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "CD99P1-201"; exon_number 7; exon_id "ENSE00001751927.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:7083"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021071.4"; havana_transcript "OTTHUMT00000391899.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
450 chrY HAVANA exon 2623385 2623453 . + . gene_id "ENSG00000223773.10_PAR_Y"; transcript_id "ENST00000527459.8_PAR_Y"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "CD99P1"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "CD99P1-201"; exon_number 8; exon_id "ENSE00001754049.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:7083"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021071.4"; havana_transcript "OTTHUMT00000391899.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
451 chrY HAVANA gene 2612988 2615347 . - . gene_id "ENSG00000230542.6_PAR_Y"; gene_type "lncRNA"; gene_name "LINC00102"; level 2; hgnc_id "HGNC:30470"; tag "PAR"; havana_gene "OTTHUMG00000021072.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
452 chrY HAVANA transcript 2612988 2615347 . - . gene_id "ENSG00000230542.6_PAR_Y"; transcript_id "ENST00000445785.6_PAR_Y"; gene_type "lncRNA"; gene_name "LINC00102"; transcript_type "lncRNA"; transcript_name "LINC00102-201"; level 2; transcript_support_level "1"; hgnc_id "HGNC:30470"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021072.1"; havana_transcript "OTTHUMT00000055623.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
453 chrY HAVANA exon 2614717 2615347 . - . gene_id "ENSG00000230542.6_PAR_Y"; transcript_id "ENST00000445785.6_PAR_Y"; gene_type "lncRNA"; gene_name "LINC00102"; transcript_type "lncRNA"; transcript_name "LINC00102-201"; exon_number 1; exon_id "ENSE00001676508.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:30470"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021072.1"; havana_transcript "OTTHUMT00000055623.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
454 chrY HAVANA exon 2612988 2613696 . - . gene_id "ENSG00000230542.6_PAR_Y"; transcript_id "ENST00000445785.6_PAR_Y"; gene_type "lncRNA"; gene_name "LINC00102"; transcript_type "lncRNA"; transcript_name "LINC00102-201"; exon_number 2; exon_id "ENSE00001595058.1"; level 2; transcript_support_level "1"; hgnc_id "HGNC:30470"; tag "basic"; tag "Ensembl_canonical"; tag "PAR"; havana_gene "OTTHUMG00000021072.1"; havana_transcript "OTTHUMT00000055623.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
455 chrY HAVANA gene 2691187 2741309 . + . gene_id "ENSG00000002586.20_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; level 2; hgnc_id "HGNC:7082"; tag "PAR"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
456 chrY ENSEMBL transcript 2691187 2741300 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
457 chrY ENSEMBL exon 2691187 2691427 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 1; exon_id "ENSE00003729830.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
458 chrY ENSEMBL CDS 2691361 2691427 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 1; exon_id "ENSE00003729830.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
459 chrY ENSEMBL start_codon 2691361 2691363 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 1; exon_id "ENSE00003729830.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
460 chrY ENSEMBL exon 2714422 2714454 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 2; exon_id "ENSE00003535342.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
461 chrY ENSEMBL CDS 2714422 2714454 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 2; exon_id "ENSE00003535342.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
462 chrY ENSEMBL exon 2717605 2717652 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 3; exon_id "ENSE00003474982.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
463 chrY ENSEMBL CDS 2717605 2717652 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 3; exon_id "ENSE00003474982.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
464 chrY ENSEMBL exon 2719661 2719705 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 4; exon_id "ENSE00003586106.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
465 chrY ENSEMBL CDS 2719661 2719705 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 4; exon_id "ENSE00003586106.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
466 chrY ENSEMBL exon 2720356 2720424 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 5; exon_id "ENSE00003578821.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
467 chrY ENSEMBL CDS 2720356 2720424 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 5; exon_id "ENSE00003578821.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
468 chrY ENSEMBL exon 2722627 2722674 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 6; exon_id "ENSE00003552837.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
469 chrY ENSEMBL CDS 2722627 2722674 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 6; exon_id "ENSE00003552837.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
470 chrY ENSEMBL exon 2723314 2723364 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 7; exon_id "ENSE00003612985.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
471 chrY ENSEMBL CDS 2723314 2723364 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 7; exon_id "ENSE00003612985.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
472 chrY ENSEMBL exon 2726260 2726373 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 8; exon_id "ENSE00003785141.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
473 chrY ENSEMBL CDS 2726260 2726373 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 8; exon_id "ENSE00003785141.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
474 chrY ENSEMBL exon 2733357 2733374 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 9; exon_id "ENSE00003715936.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
475 chrY ENSEMBL CDS 2733357 2733361 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 9; exon_id "ENSE00003715936.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
476 chrY ENSEMBL stop_codon 2733362 2733364 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 9; exon_id "ENSE00003715936.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
477 chrY ENSEMBL exon 2738203 2738256 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 10; exon_id "ENSE00003720441.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
478 chrY ENSEMBL exon 2740779 2741300 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 11; exon_id "ENSE00003713358.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
479 chrY ENSEMBL UTR 2691187 2691360 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 1; exon_id "ENSE00003729830.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
480 chrY ENSEMBL UTR 2733362 2733374 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 9; exon_id "ENSE00003715936.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
481 chrY ENSEMBL UTR 2738203 2738256 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 10; exon_id "ENSE00003720441.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
482 chrY ENSEMBL UTR 2740779 2741300 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000611428.5_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-210"; exon_number 11; exon_id "ENSE00003713358.1"; level 3; protein_id "ENSP00000479999.1"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
483 chrY HAVANA transcript 2691276 2741101 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
484 chrY HAVANA exon 2691276 2691427 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 1; exon_id "ENSE00001870387.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
485 chrY HAVANA CDS 2691361 2691427 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 1; exon_id "ENSE00001870387.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
486 chrY HAVANA start_codon 2691361 2691363 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 1; exon_id "ENSE00001870387.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
487 chrY HAVANA exon 2714422 2714454 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
488 chrY HAVANA CDS 2714422 2714454 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
489 chrY HAVANA exon 2719661 2719705 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 3; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
490 chrY HAVANA CDS 2719661 2719705 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 3; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
491 chrY HAVANA exon 2720356 2720424 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 4; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
492 chrY HAVANA CDS 2720356 2720424 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 4; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
493 chrY HAVANA exon 2722627 2722674 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 5; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
494 chrY HAVANA CDS 2722627 2722674 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 5; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
495 chrY HAVANA exon 2723314 2723364 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 6; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
496 chrY HAVANA CDS 2723314 2723364 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 6; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
497 chrY HAVANA exon 2726260 2726373 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 7; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
498 chrY HAVANA CDS 2726260 2726373 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 7; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
499 chrY HAVANA exon 2738200 2738256 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 8; exon_id "ENSE00001032174.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
500 chrY HAVANA CDS 2738200 2738256 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 8; exon_id "ENSE00001032174.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
501 chrY HAVANA exon 2740779 2741101 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 9; exon_id "ENSE00001887497.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
502 chrY HAVANA CDS 2740779 2740801 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 9; exon_id "ENSE00001887497.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
503 chrY HAVANA stop_codon 2740802 2740804 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 9; exon_id "ENSE00001887497.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
504 chrY HAVANA UTR 2691276 2691360 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 1; exon_id "ENSE00001870387.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
505 chrY HAVANA UTR 2740802 2741101 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381187.8_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-204"; exon_number 9; exon_id "ENSE00001887497.1"; level 2; protein_id "ENSP00000370582.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS48071.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055626.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
506 chrY HAVANA transcript 2691280 2733667 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
507 chrY HAVANA exon 2691280 2691427 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 1; exon_id "ENSE00001487750.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
508 chrY HAVANA CDS 2691361 2691427 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 1; exon_id "ENSE00001487750.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
509 chrY HAVANA start_codon 2691361 2691363 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 1; exon_id "ENSE00001487750.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
510 chrY HAVANA exon 2714422 2714454 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
511 chrY HAVANA CDS 2714422 2714454 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
512 chrY HAVANA exon 2717605 2717652 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 3; exon_id "ENSE00003474982.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
513 chrY HAVANA CDS 2717605 2717652 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 3; exon_id "ENSE00003474982.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
514 chrY HAVANA exon 2719661 2719705 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 4; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
515 chrY HAVANA CDS 2719661 2719705 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 4; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
516 chrY HAVANA exon 2720356 2720424 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 5; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
517 chrY HAVANA CDS 2720356 2720424 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 5; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
518 chrY HAVANA exon 2722627 2722674 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 6; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
519 chrY HAVANA CDS 2722627 2722674 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 6; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
520 chrY HAVANA exon 2723314 2723364 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 7; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
521 chrY HAVANA CDS 2723314 2723364 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 7; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
522 chrY HAVANA exon 2726260 2726373 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 8; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
523 chrY HAVANA CDS 2726260 2726373 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 8; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
524 chrY HAVANA exon 2727293 2727343 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 9; exon_id "ENSE00001487748.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
525 chrY HAVANA CDS 2727293 2727343 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 9; exon_id "ENSE00001487748.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
526 chrY HAVANA exon 2733357 2733667 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 10; exon_id "ENSE00001487747.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
527 chrY HAVANA CDS 2733357 2733361 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 10; exon_id "ENSE00001487747.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
528 chrY HAVANA stop_codon 2733362 2733364 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 10; exon_id "ENSE00001487747.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
529 chrY HAVANA UTR 2691280 2691360 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 1; exon_id "ENSE00001487750.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
530 chrY HAVANA UTR 2733362 2733667 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381184.6_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-203"; exon_number 10; exon_id "ENSE00001487747.1"; level 2; protein_id "ENSP00000370579.1"; transcript_support_level "5"; hgnc_id "HGNC:7082"; tag "dotter_confirmed"; tag "non_canonical_TEC"; tag "basic"; tag "appris_alternative_2"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055627.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
531 chrY HAVANA transcript 2691295 2741309 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
532 chrY HAVANA exon 2691295 2691427 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 1; exon_id "ENSE00001487792.5"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
533 chrY HAVANA CDS 2691361 2691427 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 1; exon_id "ENSE00001487792.5"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
534 chrY HAVANA start_codon 2691361 2691363 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 1; exon_id "ENSE00001487792.5"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
535 chrY HAVANA exon 2714422 2714454 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
536 chrY HAVANA CDS 2714422 2714454 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
537 chrY HAVANA exon 2717605 2717652 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 3; exon_id "ENSE00003474982.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
538 chrY HAVANA CDS 2717605 2717652 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 3; exon_id "ENSE00003474982.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
539 chrY HAVANA exon 2719661 2719705 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 4; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
540 chrY HAVANA CDS 2719661 2719705 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 4; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
541 chrY HAVANA exon 2720356 2720424 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 5; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
542 chrY HAVANA CDS 2720356 2720424 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 5; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
543 chrY HAVANA exon 2722627 2722674 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 6; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
544 chrY HAVANA CDS 2722627 2722674 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 6; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
545 chrY HAVANA exon 2723314 2723364 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 7; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
546 chrY HAVANA CDS 2723314 2723364 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 7; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
547 chrY HAVANA exon 2726260 2726373 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 8; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
548 chrY HAVANA CDS 2726260 2726373 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 8; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
549 chrY HAVANA exon 2738200 2738256 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 9; exon_id "ENSE00001032174.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
550 chrY HAVANA CDS 2738200 2738256 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 9; exon_id "ENSE00001032174.1"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
551 chrY HAVANA exon 2740779 2741309 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 10; exon_id "ENSE00001487771.3"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
552 chrY HAVANA CDS 2740779 2740801 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 10; exon_id "ENSE00001487771.3"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
553 chrY HAVANA stop_codon 2740802 2740804 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 10; exon_id "ENSE00001487771.3"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
554 chrY HAVANA UTR 2691295 2691360 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 1; exon_id "ENSE00001487792.5"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
555 chrY HAVANA UTR 2740802 2741309 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381192.10_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-205"; exon_number 10; exon_id "ENSE00001487771.3"; level 2; protein_id "ENSP00000370588.3"; transcript_support_level "1"; hgnc_id "HGNC:7082"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS14119.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055624.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
556 chrY HAVANA transcript 2691310 2733672 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
557 chrY HAVANA exon 2691310 2691427 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 1; exon_id "ENSE00003331907.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
558 chrY HAVANA CDS 2691361 2691427 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 1; exon_id "ENSE00003331907.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
559 chrY HAVANA start_codon 2691361 2691363 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 1; exon_id "ENSE00003331907.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
560 chrY HAVANA exon 2714422 2714454 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
561 chrY HAVANA CDS 2714422 2714454 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
562 chrY HAVANA exon 2717605 2717652 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 3; exon_id "ENSE00003474982.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
563 chrY HAVANA CDS 2717605 2717652 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 3; exon_id "ENSE00003474982.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
564 chrY HAVANA exon 2719661 2719705 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 4; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
565 chrY HAVANA CDS 2719661 2719705 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 4; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
566 chrY HAVANA exon 2720356 2720424 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 5; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
567 chrY HAVANA CDS 2720356 2720424 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 5; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
568 chrY HAVANA exon 2722627 2722674 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 6; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
569 chrY HAVANA CDS 2722627 2722674 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 6; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
570 chrY HAVANA exon 2723314 2723364 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 7; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
571 chrY HAVANA CDS 2723314 2723364 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 7; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
572 chrY HAVANA exon 2726260 2726373 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 8; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
573 chrY HAVANA CDS 2726260 2726373 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 8; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
574 chrY HAVANA exon 2733357 2733672 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 9; exon_id "ENSE00001862861.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
575 chrY HAVANA CDS 2733357 2733361 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 9; exon_id "ENSE00001862861.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
576 chrY HAVANA stop_codon 2733362 2733364 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 9; exon_id "ENSE00001862861.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
577 chrY HAVANA UTR 2691310 2691360 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 1; exon_id "ENSE00003331907.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
578 chrY HAVANA UTR 2733362 2733672 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000482405.7_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-208"; exon_number 9; exon_id "ENSE00001862861.1"; level 2; protein_id "ENSP00000494027.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS75947.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000087928.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
579 chrY HAVANA transcript 2691313 2741290 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
580 chrY HAVANA exon 2691313 2691427 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 1; exon_id "ENSE00003755750.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
581 chrY HAVANA CDS 2691361 2691427 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 1; exon_id "ENSE00003755750.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
582 chrY HAVANA start_codon 2691361 2691363 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 1; exon_id "ENSE00003755750.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
583 chrY HAVANA exon 2714422 2714454 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
584 chrY HAVANA CDS 2714422 2714454 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 2; exon_id "ENSE00003535342.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
585 chrY HAVANA exon 2717605 2717652 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 3; exon_id "ENSE00003474982.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
586 chrY HAVANA CDS 2717605 2717652 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 3; exon_id "ENSE00003474982.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
587 chrY HAVANA exon 2719661 2719705 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 4; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
588 chrY HAVANA CDS 2719661 2719705 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 4; exon_id "ENSE00003586106.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
589 chrY HAVANA exon 2720356 2720424 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 5; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
590 chrY HAVANA CDS 2720356 2720424 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 5; exon_id "ENSE00003578821.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
591 chrY HAVANA exon 2722627 2722674 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 6; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
592 chrY HAVANA CDS 2722627 2722674 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 6; exon_id "ENSE00003552837.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
593 chrY HAVANA exon 2723314 2723364 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 7; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
594 chrY HAVANA CDS 2723314 2723364 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 7; exon_id "ENSE00003612985.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
595 chrY HAVANA exon 2726260 2726373 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 8; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
596 chrY HAVANA CDS 2726260 2726373 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 8; exon_id "ENSE00003785141.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
597 chrY HAVANA exon 2738203 2738256 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 9; exon_id "ENSE00003758767.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
598 chrY HAVANA CDS 2738203 2738256 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 9; exon_id "ENSE00003758767.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
599 chrY HAVANA exon 2740779 2741290 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 10; exon_id "ENSE00003758362.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
600 chrY HAVANA CDS 2740779 2740801 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 10; exon_id "ENSE00003758362.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
601 chrY HAVANA stop_codon 2740802 2740804 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 10; exon_id "ENSE00003758362.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
602 chrY HAVANA UTR 2691313 2691360 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 1; exon_id "ENSE00003755750.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
603 chrY HAVANA UTR 2740802 2741290 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000624481.4_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-212"; exon_number 10; exon_id "ENSE00003758362.1"; level 2; protein_id "ENSP00000485427.1"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "NAGNAG_splice_site"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; tag "PAR"; ccdsid "CCDS83452.1"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000478890.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
604 chrY HAVANA transcript 2691361 2692253 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381180.9_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-202"; level 2; protein_id "ENSP00000370573.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055625.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
605 chrY HAVANA exon 2691361 2691427 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381180.9_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-202"; exon_number 1; exon_id "ENSE00001902734.1"; level 2; protein_id "ENSP00000370573.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055625.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
606 chrY HAVANA CDS 2691361 2691427 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381180.9_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-202"; exon_number 1; exon_id "ENSE00001902734.1"; level 2; protein_id "ENSP00000370573.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055625.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
607 chrY HAVANA start_codon 2691361 2691363 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381180.9_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-202"; exon_number 1; exon_id "ENSE00001902734.1"; level 2; protein_id "ENSP00000370573.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055625.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
608 chrY HAVANA exon 2691788 2692253 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381180.9_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-202"; exon_number 2; exon_id "ENSE00001669439.3"; level 2; protein_id "ENSP00000370573.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055625.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
609 chrY HAVANA CDS 2691788 2691948 . + 2 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381180.9_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-202"; exon_number 2; exon_id "ENSE00001669439.3"; level 2; protein_id "ENSP00000370573.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055625.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
610 chrY HAVANA stop_codon 2691949 2691951 . + 0 gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381180.9_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-202"; exon_number 2; exon_id "ENSE00001669439.3"; level 2; protein_id "ENSP00000370573.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055625.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
611 chrY HAVANA UTR 2691949 2692253 . + . gene_id "ENSG00000002586.20_PAR_Y"; transcript_id "ENST00000381180.9_PAR_Y"; gene_type "protein_coding"; gene_name "CD99"; transcript_type "protein_coding"; transcript_name "CD99-202"; exon_number 2; exon_id "ENSE00001669439.3"; level 2; protein_id "ENSP00000370573.3"; transcript_support_level "2"; hgnc_id "HGNC:7082"; tag "basic"; tag "PAR"; havana_gene "OTTHUMG00000021073.12"; havana_transcript "OTTHUMT00000055625.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
612 chrY HAVANA gene 2752083 2854641 . + . gene_id "ENSG00000290840.1"; gene_type "lncRNA"; gene_name "XGY2"; level 2; hgnc_id "HGNC:34022"; tag "ncRNA_host"; tag "overlaps_pseudogene";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
613 chrY HAVANA transcript 2752083 2790921 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680285.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-204"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
614 chrY HAVANA exon 2752083 2752335 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680285.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-204"; exon_number 1; exon_id "ENSE00003911762.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
615 chrY HAVANA exon 2770550 2770591 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680285.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-204"; exon_number 2; exon_id "ENSE00003911362.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
616 chrY HAVANA exon 2774716 2774739 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680285.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-204"; exon_number 3; exon_id "ENSE00003911952.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
617 chrY HAVANA exon 2789749 2790921 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680285.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-204"; exon_number 4; exon_id "ENSE00003911811.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
618 chrY HAVANA transcript 2752296 2787570 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000679825.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-202"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
619 chrY HAVANA exon 2752296 2752335 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000679825.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-202"; exon_number 1; exon_id "ENSE00003910826.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
620 chrY HAVANA exon 2770550 2770591 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000679825.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-202"; exon_number 2; exon_id "ENSE00003911362.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
621 chrY HAVANA exon 2774716 2774739 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000679825.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-202"; exon_number 3; exon_id "ENSE00003911952.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
622 chrY HAVANA exon 2786995 2787570 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000679825.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-202"; exon_number 4; exon_id "ENSE00003911272.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
623 chrY HAVANA transcript 2752296 2787634 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680845.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-205"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
624 chrY HAVANA exon 2752296 2752335 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680845.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-205"; exon_number 1; exon_id "ENSE00003910826.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
625 chrY HAVANA exon 2770550 2770591 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680845.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-205"; exon_number 2; exon_id "ENSE00003911362.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
626 chrY HAVANA exon 2774716 2774739 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680845.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-205"; exon_number 3; exon_id "ENSE00003911952.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
627 chrY HAVANA exon 2786995 2787053 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680845.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-205"; exon_number 4; exon_id "ENSE00003910797.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
628 chrY HAVANA exon 2787480 2787634 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000680845.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-205"; exon_number 5; exon_id "ENSE00003913008.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
629 chrY HAVANA transcript 2752296 2845689 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681787.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-206"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
630 chrY HAVANA exon 2752296 2752335 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681787.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-206"; exon_number 1; exon_id "ENSE00003910826.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
631 chrY HAVANA exon 2770550 2770591 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681787.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-206"; exon_number 2; exon_id "ENSE00003911362.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
632 chrY HAVANA exon 2774716 2774739 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681787.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-206"; exon_number 3; exon_id "ENSE00003911952.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
633 chrY HAVANA exon 2841028 2841083 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681787.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-206"; exon_number 4; exon_id "ENSE00003913712.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
634 chrY HAVANA exon 2841486 2841627 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681787.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-206"; exon_number 5; exon_id "ENSE00003911204.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
635 chrY HAVANA exon 2842165 2842242 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681787.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-206"; exon_number 6; exon_id "ENSE00003912525.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
636 chrY HAVANA exon 2844077 2844257 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681787.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-206"; exon_number 7; exon_id "ENSE00003915647.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
637 chrY HAVANA exon 2845646 2845689 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681787.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-206"; exon_number 8; exon_id "ENSE00003915022.1"; level 2; hgnc_id "HGNC:34022"; tag "basic";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
638 chrY HAVANA transcript 2752296 2854641 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681940.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-207"; level 2; hgnc_id "HGNC:34022"; tag "basic"; tag "Ensembl_canonical";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
639 chrY HAVANA exon 2752296 2752335 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681940.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-207"; exon_number 1; exon_id "ENSE00003910826.1"; level 2; hgnc_id "HGNC:34022"; tag "basic"; tag "Ensembl_canonical";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
640 chrY HAVANA exon 2770550 2770591 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681940.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-207"; exon_number 2; exon_id "ENSE00003911362.1"; level 2; hgnc_id "HGNC:34022"; tag "basic"; tag "Ensembl_canonical";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
641 chrY HAVANA exon 2774716 2774739 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681940.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-207"; exon_number 3; exon_id "ENSE00003911952.1"; level 2; hgnc_id "HGNC:34022"; tag "basic"; tag "Ensembl_canonical";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
642 chrY HAVANA exon 2845646 2845743 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681940.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-207"; exon_number 4; exon_id "ENSE00003915199.1"; level 2; hgnc_id "HGNC:34022"; tag "basic"; tag "Ensembl_canonical";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
643 chrY HAVANA exon 2854600 2854641 . + . gene_id "ENSG00000290840.1"; transcript_id "ENST00000681940.1"; gene_type "lncRNA"; gene_name "XGY2"; transcript_type "lncRNA"; transcript_name "XGY2-207"; exon_number 5; exon_id "ENSE00003911477.1"; level 2; hgnc_id "HGNC:34022"; tag "basic"; tag "Ensembl_canonical";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
644 chrY ENSEMBL gene 2784749 2784853 . + . gene_id "ENSG00000251841.1"; gene_type "snRNA"; gene_name "RNU6-1334P"; level 3; hgnc_id "HGNC:48297";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
645 chrY ENSEMBL transcript 2784749 2784853 . + . gene_id "ENSG00000251841.1"; transcript_id "ENST00000516032.1"; gene_type "snRNA"; gene_name "RNU6-1334P"; transcript_type "snRNA"; transcript_name "RNU6-1334P-201"; level 3; transcript_support_level "NA"; hgnc_id "HGNC:48297"; tag "basic"; tag "Ensembl_canonical";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
646 chrY ENSEMBL exon 2784749 2784853 . + . gene_id "ENSG00000251841.1"; transcript_id "ENST00000516032.1"; gene_type "snRNA"; gene_name "RNU6-1334P"; transcript_type "snRNA"; transcript_name "RNU6-1334P-201"; exon_number 1; exon_id "ENSE00002088309.1"; level 3; transcript_support_level "NA"; hgnc_id "HGNC:48297"; tag "basic"; tag "Ensembl_canonical";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
647 chrY HAVANA gene 2786855 2787682 . - . gene_id "ENSG00000184895.8"; gene_type "protein_coding"; gene_name "SRY"; level 2; hgnc_id "HGNC:11311"; havana_gene "OTTHUMG00000036084.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
648 chrY HAVANA transcript 2786855 2787682 . - . gene_id "ENSG00000184895.8"; transcript_id "ENST00000383070.2"; gene_type "protein_coding"; gene_name "SRY"; transcript_type "protein_coding"; transcript_name "SRY-201"; level 2; protein_id "ENSP00000372547.1"; transcript_support_level "NA"; hgnc_id "HGNC:11311"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14772.1"; havana_gene "OTTHUMG00000036084.2"; havana_transcript "OTTHUMT00000087931.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
649 chrY HAVANA exon 2786855 2787682 . - . gene_id "ENSG00000184895.8"; transcript_id "ENST00000383070.2"; gene_type "protein_coding"; gene_name "SRY"; transcript_type "protein_coding"; transcript_name "SRY-201"; exon_number 1; exon_id "ENSE00001494622.2"; level 2; protein_id "ENSP00000372547.1"; transcript_support_level "NA"; hgnc_id "HGNC:11311"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14772.1"; havana_gene "OTTHUMG00000036084.2"; havana_transcript "OTTHUMT00000087931.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
650 chrY HAVANA CDS 2786992 2787603 . - 0 gene_id "ENSG00000184895.8"; transcript_id "ENST00000383070.2"; gene_type "protein_coding"; gene_name "SRY"; transcript_type "protein_coding"; transcript_name "SRY-201"; exon_number 1; exon_id "ENSE00001494622.2"; level 2; protein_id "ENSP00000372547.1"; transcript_support_level "NA"; hgnc_id "HGNC:11311"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14772.1"; havana_gene "OTTHUMG00000036084.2"; havana_transcript "OTTHUMT00000087931.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
651 chrY HAVANA start_codon 2787601 2787603 . - 0 gene_id "ENSG00000184895.8"; transcript_id "ENST00000383070.2"; gene_type "protein_coding"; gene_name "SRY"; transcript_type "protein_coding"; transcript_name "SRY-201"; exon_number 1; exon_id "ENSE00001494622.2"; level 2; protein_id "ENSP00000372547.1"; transcript_support_level "NA"; hgnc_id "HGNC:11311"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14772.1"; havana_gene "OTTHUMG00000036084.2"; havana_transcript "OTTHUMT00000087931.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
652 chrY HAVANA stop_codon 2786989 2786991 . - 0 gene_id "ENSG00000184895.8"; transcript_id "ENST00000383070.2"; gene_type "protein_coding"; gene_name "SRY"; transcript_type "protein_coding"; transcript_name "SRY-201"; exon_number 1; exon_id "ENSE00001494622.2"; level 2; protein_id "ENSP00000372547.1"; transcript_support_level "NA"; hgnc_id "HGNC:11311"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14772.1"; havana_gene "OTTHUMG00000036084.2"; havana_transcript "OTTHUMT00000087931.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
653 chrY HAVANA UTR 2786855 2786991 . - . gene_id "ENSG00000184895.8"; transcript_id "ENST00000383070.2"; gene_type "protein_coding"; gene_name "SRY"; transcript_type "protein_coding"; transcript_name "SRY-201"; exon_number 1; exon_id "ENSE00001494622.2"; level 2; protein_id "ENSP00000372547.1"; transcript_support_level "NA"; hgnc_id "HGNC:11311"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14772.1"; havana_gene "OTTHUMG00000036084.2"; havana_transcript "OTTHUMT00000087931.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
654 chrY HAVANA UTR 2787604 2787682 . - . gene_id "ENSG00000184895.8"; transcript_id "ENST00000383070.2"; gene_type "protein_coding"; gene_name "SRY"; transcript_type "protein_coding"; transcript_name "SRY-201"; exon_number 1; exon_id "ENSE00001494622.2"; level 2; protein_id "ENSP00000372547.1"; transcript_support_level "NA"; hgnc_id "HGNC:11311"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14772.1"; havana_gene "OTTHUMG00000036084.2"; havana_transcript "OTTHUMT00000087931.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
655 chrY HAVANA gene 2789827 2790328 . + . gene_id "ENSG00000237659.1"; gene_type "processed_pseudogene"; gene_name "RNASEH2CP1"; level 1; hgnc_id "HGNC:24117"; tag "pseudo_consens"; tag "overlapping_locus"; havana_gene "OTTHUMG00000036081.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
656 chrY HAVANA transcript 2789827 2790328 . + . gene_id "ENSG00000237659.1"; transcript_id "ENST00000454281.1"; gene_type "processed_pseudogene"; gene_name "RNASEH2CP1"; transcript_type "processed_pseudogene"; transcript_name "RNASEH2CP1-201"; level 1; transcript_support_level "NA"; hgnc_id "HGNC:24117"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000036081.1"; havana_transcript "OTTHUMT00000087926.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
657 chrY HAVANA exon 2789827 2790328 . + . gene_id "ENSG00000237659.1"; transcript_id "ENST00000454281.1"; gene_type "processed_pseudogene"; gene_name "RNASEH2CP1"; transcript_type "processed_pseudogene"; transcript_name "RNASEH2CP1-201"; exon_number 1; exon_id "ENSE00001772499.1"; level 1; transcript_support_level "NA"; hgnc_id "HGNC:24117"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000036081.1"; havana_transcript "OTTHUMT00000087926.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
658 chrY HAVANA gene 2827982 2828218 . + . gene_id "ENSG00000232195.1"; gene_type "processed_pseudogene"; gene_name "TOMM22P2"; level 1; hgnc_id "HGNC:38737"; tag "pseudo_consens"; tag "overlapping_locus"; havana_gene "OTTHUMG00000036083.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
659 chrY HAVANA transcript 2827982 2828218 . + . gene_id "ENSG00000232195.1"; transcript_id "ENST00000430735.1"; gene_type "processed_pseudogene"; gene_name "TOMM22P2"; transcript_type "processed_pseudogene"; transcript_name "TOMM22P2-201"; level 1; transcript_support_level "NA"; hgnc_id "HGNC:38737"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000036083.2"; havana_transcript "OTTHUMT00000087930.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
660 chrY HAVANA exon 2827982 2828218 . + . gene_id "ENSG00000232195.1"; transcript_id "ENST00000430735.1"; gene_type "processed_pseudogene"; gene_name "TOMM22P2"; transcript_type "processed_pseudogene"; transcript_name "TOMM22P2-201"; exon_number 1; exon_id "ENSE00001614266.1"; level 1; transcript_support_level "NA"; hgnc_id "HGNC:38737"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000036083.2"; havana_transcript "OTTHUMT00000087930.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
661 chrY HAVANA gene 2828192 2840851 . - . gene_id "ENSG00000286130.1"; gene_type "lncRNA"; gene_name "ENSG00000286130"; level 2; havana_gene "OTTHUMG00000193434.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
662 chrY HAVANA transcript 2828192 2840851 . - . gene_id "ENSG00000286130.1"; transcript_id "ENST00000651710.1"; gene_type "lncRNA"; gene_name "ENSG00000286130"; transcript_type "lncRNA"; transcript_name "ENST00000651710"; level 2; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000193434.1"; havana_transcript "OTTHUMT00000501642.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
663 chrY HAVANA exon 2840471 2840851 . - . gene_id "ENSG00000286130.1"; transcript_id "ENST00000651710.1"; gene_type "lncRNA"; gene_name "ENSG00000286130"; transcript_type "lncRNA"; transcript_name "ENST00000651710"; exon_number 1; exon_id "ENSE00003844499.1"; level 2; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000193434.1"; havana_transcript "OTTHUMT00000501642.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
664 chrY HAVANA exon 2829526 2829751 . - . gene_id "ENSG00000286130.1"; transcript_id "ENST00000651710.1"; gene_type "lncRNA"; gene_name "ENSG00000286130"; transcript_type "lncRNA"; transcript_name "ENST00000651710"; exon_number 2; exon_id "ENSE00003846102.1"; level 2; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000193434.1"; havana_transcript "OTTHUMT00000501642.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
665 chrY HAVANA exon 2828192 2828735 . - . gene_id "ENSG00000286130.1"; transcript_id "ENST00000651710.1"; gene_type "lncRNA"; gene_name "ENSG00000286130"; transcript_type "lncRNA"; transcript_name "ENST00000651710"; exon_number 3; exon_id "ENSE00003843322.1"; level 2; tag "RNA_Seq_supported_only"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000193434.1"; havana_transcript "OTTHUMT00000501642.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
666 chrY HAVANA gene 2841602 2932000 . + . gene_id "ENSG00000129824.16"; gene_type "protein_coding"; gene_name "RPS4Y1"; level 2; hgnc_id "HGNC:10425"; tag "overlapping_locus"; havana_gene "OTTHUMG00000036152.5";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
667 chrY HAVANA transcript 2841602 2867268 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
668 chrY HAVANA exon 2841602 2841627 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 1; exon_id "ENSE00002490412.2"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
669 chrY HAVANA CDS 2841625 2841627 . + 0 gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 1; exon_id "ENSE00002490412.2"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
670 chrY HAVANA start_codon 2841625 2841627 . + 0 gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 1; exon_id "ENSE00002490412.2"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
671 chrY HAVANA exon 2842165 2842242 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 2; exon_id "ENSE00001709586.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
672 chrY HAVANA CDS 2842165 2842242 . + 0 gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 2; exon_id "ENSE00001709586.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
673 chrY HAVANA exon 2844077 2844257 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 3; exon_id "ENSE00001738202.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
674 chrY HAVANA CDS 2844077 2844257 . + 0 gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 3; exon_id "ENSE00001738202.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
675 chrY HAVANA exon 2845646 2845743 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 4; exon_id "ENSE00001602849.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
676 chrY HAVANA CDS 2845646 2845743 . + 2 gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 4; exon_id "ENSE00001602849.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
677 chrY HAVANA exon 2854600 2854771 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 5; exon_id "ENSE00001601989.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
678 chrY HAVANA CDS 2854600 2854771 . + 0 gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 5; exon_id "ENSE00001601989.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
679 chrY HAVANA exon 2865088 2865245 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 6; exon_id "ENSE00003667463.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
680 chrY HAVANA CDS 2865088 2865245 . + 2 gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 6; exon_id "ENSE00003667463.1"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
681 chrY HAVANA exon 2866793 2867268 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 7; exon_id "ENSE00003636667.2"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
682 chrY HAVANA CDS 2866793 2866891 . + 0 gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 7; exon_id "ENSE00003636667.2"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
683 chrY HAVANA stop_codon 2866892 2866894 . + 0 gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 7; exon_id "ENSE00003636667.2"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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diff changeset
684 chrY HAVANA UTR 2841602 2841624 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 1; exon_id "ENSE00002490412.2"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
685 chrY HAVANA UTR 2866892 2867268 . + . gene_id "ENSG00000129824.16"; transcript_id "ENST00000250784.13"; gene_type "protein_coding"; gene_name "RPS4Y1"; transcript_type "protein_coding"; transcript_name "RPS4Y1-201"; exon_number 7; exon_id "ENSE00003636667.2"; level 2; protein_id "ENSP00000250784.7"; transcript_support_level "1"; hgnc_id "HGNC:10425"; tag "basic"; tag "Ensembl_canonical"; tag "MANE_Select"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS14773.1"; havana_gene "OTTHUMG00000036152.5"; havana_transcript "OTTHUMT00000088052.3";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
686 chrY HAVANA gene 2881683 2883652 . - . gene_id "ENSG00000227289.3"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "HSFY3P"; level 2; hgnc_id "HGNC:37119"; havana_gene "OTTHUMG00000036161.2";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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diff changeset
687 chrY HAVANA transcript 2881683 2883652 . - . gene_id "ENSG00000227289.3"; transcript_id "ENST00000444242.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "HSFY3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "HSFY3P-201"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:37119"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000036161.2"; havana_transcript "OTTHUMT00000088068.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
688 chrY HAVANA exon 2883141 2883652 . - . gene_id "ENSG00000227289.3"; transcript_id "ENST00000444242.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "HSFY3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "HSFY3P-201"; exon_number 1; exon_id "ENSE00001600631.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:37119"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000036161.2"; havana_transcript "OTTHUMT00000088068.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
689 chrY HAVANA exon 2881683 2882361 . - . gene_id "ENSG00000227289.3"; transcript_id "ENST00000444242.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "HSFY3P"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "HSFY3P-201"; exon_number 2; exon_id "ENSE00001611586.1"; level 2; transcript_support_level "NA"; hgnc_id "HGNC:37119"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; tag "Ensembl_canonical"; havana_gene "OTTHUMG00000036161.2"; havana_transcript "OTTHUMT00000088068.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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diff changeset
690 chrY HAVANA gene 2883110 2890551 . - . gene_id "ENSG00000290841.1"; gene_type "lncRNA"; gene_name "ENSG00000290841"; level 2; tag "overlaps_pseudogene";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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diff changeset
691 chrY HAVANA transcript 2883110 2890551 . - . gene_id "ENSG00000290841.1"; transcript_id "ENST00000652562.1"; gene_type "lncRNA"; gene_name "ENSG00000290841"; transcript_type "lncRNA"; transcript_name "ENST00000652562"; level 2; tag "basic"; tag "Ensembl_canonical"; havana_transcript "OTTHUMT00000498737.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
692 chrY HAVANA exon 2890422 2890551 . - . gene_id "ENSG00000290841.1"; transcript_id "ENST00000652562.1"; gene_type "lncRNA"; gene_name "ENSG00000290841"; transcript_type "lncRNA"; transcript_name "ENST00000652562"; exon_number 1; exon_id "ENSE00003842237.1"; level 2; tag "basic"; tag "Ensembl_canonical"; havana_transcript "OTTHUMT00000498737.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
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diff changeset
693 chrY HAVANA exon 2888445 2888562 . - . gene_id "ENSG00000290841.1"; transcript_id "ENST00000652562.1"; gene_type "lncRNA"; gene_name "ENSG00000290841"; transcript_type "lncRNA"; transcript_name "ENST00000652562"; exon_number 2; exon_id "ENSE00003849860.1"; level 2; tag "basic"; tag "Ensembl_canonical"; havana_transcript "OTTHUMT00000498737.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
694 chrY HAVANA exon 2887143 2887243 . - . gene_id "ENSG00000290841.1"; transcript_id "ENST00000652562.1"; gene_type "lncRNA"; gene_name "ENSG00000290841"; transcript_type "lncRNA"; transcript_name "ENST00000652562"; exon_number 3; exon_id "ENSE00003841669.1"; level 2; tag "basic"; tag "Ensembl_canonical"; havana_transcript "OTTHUMT00000498737.1";
8ba672d0d8aa planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/episcanpy/ commit ce8ee43d7285503a24c7b0f55c09c513be8c66f5
iuc
parents:
diff changeset
695 chrY HAVANA exon 2883110 2883407 . - . gene_id "ENSG00000290841.1"; transcript_id "ENST00000652562.1"; gene_type "lncRNA"; gene_name "ENSG00000290841"; transcript_type "lncRNA"; transcript_name "ENST00000652562"; exon_number 4; exon_id "ENSE00003843283.1"; level 2; tag "basic"; tag "Ensembl_canonical"; havana_transcript "OTTHUMT00000498737.1";