Mercurial > repos > iuc > fasttree

changeset 4:bc939965ce41 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fasttree commit a90964e5fc45313b74753e1686575102475825b0
author iuc
date Mon, 16 Dec 2024 13:33:53 +0000
parents 3aa7c6da1696
children
files fasttree.xml
diffstat 1 files changed, 8 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/fasttree.xml	Sat Oct 05 10:02:39 2024 +0000
+++ b/fasttree.xml	Mon Dec 16 13:33:53 2024 +0000
@@ -90,7 +90,7 @@
                 </conditional>
             </when>
         </conditional>
-        <param name="save_logfile" type="boolean" truevalue="" falsevalue="" checked="false" label="Save log file output" />
+        <param name="save_logfile" type="boolean" checked="false" label="Save log file output" />
         <conditional name="model_selector">
             <param name="format" type="select" label="Protein or nucleotide alignment" help="Specify if the aligned sequences are nucleotide or protein sequences">
                 <option value="-nt">Nucleotide</option>
@@ -154,6 +154,13 @@
             <output name="output" file="tree.nhx" ftype="nhx" lines_diff="2" />
             <output name="log" file="log.txt" ftype="txt" compare="contains" />
         </test>
+        <test expect_num_outputs="1">
+            <param name="select_format" value="fasta" />
+            <param name="model" value="" />
+            <param name="input" value="aligned.fasta" />
+            <param name="format" value="-nt" />
+            <output name="output" file="tree.nhx" ftype="nhx" lines_diff="2" />
+        </test>
     </tests>
     <help>
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