Mercurial > repos > iuc > funannotate_clean
diff test-data/predict_scratch/Genus_species.tbl @ 0:b5ec3983deda draft
"planemo upload commit 9613152729099079c7465c3d5d42005ef22ca91e"
author | iuc |
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date | Thu, 26 Aug 2021 06:57:03 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/predict_scratch/Genus_species.tbl Thu Aug 26 06:57:03 2021 +0000 @@ -0,0 +1,234 @@ +>Feature sample +1 215740 REFERENCE + CFMR 12345 +1466 1092 gene + locus_tag FUN_000001 +1466 1092 mRNA + product hypothetical protein + transcript_id gnl|ncbi|FUN_000001-T1_mrna + protein_id gnl|ncbi|FUN_000001-T1 +1466 1092 CDS + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000001-T1_mrna + protein_id gnl|ncbi|FUN_000001-T1 +3142 2565 gene + locus_tag FUN_000002 +3142 3138 mRNA +3004 2883 +2686 2565 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000002-T1_mrna + protein_id gnl|ncbi|FUN_000002-T1 +3142 3138 CDS +3004 2883 +2686 2565 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000002-T1_mrna + protein_id gnl|ncbi|FUN_000002-T1 +5802 4248 gene + locus_tag FUN_000003 +5802 5797 mRNA +5539 4937 +4742 4248 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000003-T1_mrna + protein_id gnl|ncbi|FUN_000003-T1 +5802 5797 CDS +5539 4937 +4742 4248 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000003-T1_mrna + protein_id gnl|ncbi|FUN_000003-T1 +10664 7691 gene + locus_tag FUN_000004 +10664 10657 mRNA +10499 8707 +8385 7691 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000004-T1_mrna + protein_id gnl|ncbi|FUN_000004-T1 +10664 10657 CDS +10499 8707 +8385 7691 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000004-T1_mrna + protein_id gnl|ncbi|FUN_000004-T1 +15214 14247 gene + locus_tag FUN_000005 +15214 15209 mRNA +14648 14247 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000005-T1_mrna + protein_id gnl|ncbi|FUN_000005-T1 +15214 15209 CDS +14648 14247 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000005-T1_mrna + protein_id gnl|ncbi|FUN_000005-T1 +15539 16619 gene + locus_tag FUN_000006 +15539 15543 mRNA +15646 15919 +16485 16619 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000006-T1_mrna + protein_id gnl|ncbi|FUN_000006-T1 +15539 15543 CDS +15646 15919 +16485 16619 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000006-T1_mrna + protein_id gnl|ncbi|FUN_000006-T1 +21705 18358 gene + locus_tag FUN_000007 +21705 21700 mRNA +21515 19638 +19482 18358 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000007-T1_mrna + protein_id gnl|ncbi|FUN_000007-T1 +21705 21700 CDS +21515 19638 +19482 18358 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000007-T1_mrna + protein_id gnl|ncbi|FUN_000007-T1 +35679 34843 gene + locus_tag FUN_000008 +35679 34843 mRNA + product hypothetical protein + transcript_id gnl|ncbi|FUN_000008-T1_mrna + protein_id gnl|ncbi|FUN_000008-T1 +35679 34843 CDS + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000008-T1_mrna + protein_id gnl|ncbi|FUN_000008-T1 +40223 44130 gene + locus_tag FUN_000009 +40223 40396 mRNA +40659 41193 +41707 42080 +43409 43609 +43678 44130 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000009-T1_mrna + protein_id gnl|ncbi|FUN_000009-T1 +40223 40396 CDS +40659 41193 +41707 42080 +43409 43609 +43678 44130 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000009-T1_mrna + protein_id gnl|ncbi|FUN_000009-T1 +87202 88320 gene + locus_tag FUN_000010 +87202 87207 mRNA +88054 88320 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000010-T1_mrna + protein_id gnl|ncbi|FUN_000010-T1 +87202 87207 CDS +88054 88320 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000010-T1_mrna + protein_id gnl|ncbi|FUN_000010-T1 +106221 102510 gene + locus_tag FUN_000011 +106221 106216 mRNA +104632 104258 +103947 103696 +103618 103229 +103151 102510 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000011-T1_mrna + protein_id gnl|ncbi|FUN_000011-T1 +106221 106216 CDS +104632 104258 +103947 103696 +103618 103229 +103151 102510 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000011-T1_mrna + protein_id gnl|ncbi|FUN_000011-T1 +167121 169212 gene + locus_tag FUN_000012 +167121 168069 mRNA +168722 169212 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000012-T1_mrna + protein_id gnl|ncbi|FUN_000012-T1 +167121 168069 CDS +168722 169212 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000012-T1_mrna + protein_id gnl|ncbi|FUN_000012-T1 +180262 180579 gene + locus_tag FUN_000013 +180262 180267 mRNA +180400 180579 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000013-T1_mrna + protein_id gnl|ncbi|FUN_000013-T1 +180262 180267 CDS +180400 180579 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000013-T1_mrna + protein_id gnl|ncbi|FUN_000013-T1 +210553 208619 gene + locus_tag FUN_000014 +210553 210548 mRNA +210474 209053 +208645 208619 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000014-T1_mrna + protein_id gnl|ncbi|FUN_000014-T1 +210553 210548 CDS +210474 209053 +208645 208619 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000014-T1_mrna + protein_id gnl|ncbi|FUN_000014-T1 +>Feature sample4 +1 7560 REFERENCE + CFMR 12345 +1466 1092 gene + locus_tag FUN_000015 +1466 1092 mRNA + product hypothetical protein + transcript_id gnl|ncbi|FUN_000015-T1_mrna + protein_id gnl|ncbi|FUN_000015-T1 +1466 1092 CDS + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000015-T1_mrna + protein_id gnl|ncbi|FUN_000015-T1 +2126 >3537 gene + locus_tag FUN_000016 +2126 2199 mRNA +2258 3224 +3284 >3537 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000016-T1_mrna + protein_id gnl|ncbi|FUN_000016-T1 +2126 2199 CDS +2258 3224 +3284 >3537 + codon_start 1 + product hypothetical protein + transcript_id gnl|ncbi|FUN_000016-T1_mrna + protein_id gnl|ncbi|FUN_000016-T1